Gene Pnap_4677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4677 
Symbol 
ID4685873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp60764 
End bp61114 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content55% 
IMG OID639826672 
Producttransposase, IS4 family protein 
Protein accessionYP_973835 
Protein GI121583404 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.692976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0315597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGTGC GCTTTATTTT GACGGGAGGC CAGGCAGCGG ACGTCACCCA AGCGATTCCC 
CTCATGACGG ATATTGGCAG CACGGGCGCG CTGCTGGCTG ACAAGGGGTA TGACGCCAAT
GCATTGCTCG ACTGGCTCGG GCAGCGTGAC ATTGCGGCGG TGATACCGCC CAAGGCAAAT
CGAAAGATGC AACGAAGCTG TGACTGGTAC CAATACAAGG AGCGTCATGT CATCGAATGC
ATGTTTGGCA AACTCAAATA CTTTCGCCGG ATTGCCACCC GCTATGAGAA GAAAGCCAGC
CATTTCATGG AAATGCTGGC CTTCTCTGCG GTTTTGTTGT GGCTGCGCTG A
 
Protein sequence
MPVRFILTGG QAADVTQAIP LMTDIGSTGA LLADKGYDAN ALLDWLGQRD IAAVIPPKAN 
RKMQRSCDWY QYKERHVIEC MFGKLKYFRR IATRYEKKAS HFMEMLAFSA VLLWLR