Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4677 |
Symbol | |
ID | 4685873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008760 |
Strand | - |
Start bp | 60764 |
End bp | 61114 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639826672 |
Product | transposase, IS4 family protein |
Protein accession | YP_973835 |
Protein GI | 121583404 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.692976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.0315597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGTGC GCTTTATTTT GACGGGAGGC CAGGCAGCGG ACGTCACCCA AGCGATTCCC CTCATGACGG ATATTGGCAG CACGGGCGCG CTGCTGGCTG ACAAGGGGTA TGACGCCAAT GCATTGCTCG ACTGGCTCGG GCAGCGTGAC ATTGCGGCGG TGATACCGCC CAAGGCAAAT CGAAAGATGC AACGAAGCTG TGACTGGTAC CAATACAAGG AGCGTCATGT CATCGAATGC ATGTTTGGCA AACTCAAATA CTTTCGCCGG ATTGCCACCC GCTATGAGAA GAAAGCCAGC CATTTCATGG AAATGCTGGC CTTCTCTGCG GTTTTGTTGT GGCTGCGCTG A
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Protein sequence | MPVRFILTGG QAADVTQAIP LMTDIGSTGA LLADKGYDAN ALLDWLGQRD IAAVIPPKAN RKMQRSCDWY QYKERHVIEC MFGKLKYFRR IATRYEKKAS HFMEMLAFSA VLLWLR
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