Gene Pnap_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4674 
Symbol 
ID4685870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp58612 
End bp59625 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID639826669 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_973832 
Protein GI121583401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.501006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.0721593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAG TGAGTTGCGT GTTTCCAAAA CAGAAGCTTT GCCATGTGAC AAAGCCTCTT 
CTGATTATTT TGGCCGCAGG CCTGACAGCA TGCGCAGTAC AGGCACCGCC CGTTGCCCAG
AAAGACGCGC CACAGTCCCT GGCCACGCAA AAAGCTGCCC AGCAGGCCGT CGCATCGCAG
GCGCCCGCCA CCCCGACACT GAAAAGAAAA ATCGCGCTGG GCCGCATCAC CAACGAAACC
AGTTACGGCC AGTCGCTCCT GCGTGATCGG CATGACGATC CATTGGGCAA ACAGGTGACG
GATCTGATGA GCAAGGCGCT CACGGAGTCG GGCGCTTACC TGGTCTTTGA GCGGCCGGAC
ATCGGCCGCA TCCAAGCAGA GGGCCGGCTG ACCGACACCA AGCTCAACAT CGTCGGGGTT
GACGCCTTGA TCATTGGATC ACTGACTGAA TTTGGCCGCA AGGCAATTGG CGCCACAGGC
TTTGTGTCCT CCAGCAAGCG ACAGGTCGCT TTTGCCAAGG TGGACATACG GGTGGTTGAC
GTGAACACGG GTCATGTGTT TTTCGCTACC TCAGGTGCCG GCGAAGCATC CACGGAGACA
GCATCGACCT TCGGATTCGG CTCGCAGGCA GGCTACGACG GCACGCTCAA TGACGCAGCT
ATCCGACAGG CCGTTGCCGA AGCCATCAAC CGCCTGTCGG TGGAGATGAG CGGGCGGCCC
TGGCAGACGT ATCTGCTGAA GGTTGACGGA TACCGCGTCT TTATAGGCGG CGGCAAGAGC
CAAGGAGTCA AGCCCGGCAT GCAGTTCTCT GTCCAGACCC AGGGTGAGCA AGTCAAATCC
CCTCAGACAG GGGCCATGGT GACGCTGCCA GGTCAGGCTA TCGCGCAGAT CCGGGTCGAC
GCGCTGTTTG GCGACAGCGA ACTCAACGAA GGCGCTGTCG CGTCCATCGC GTCCGGTTCC
CTGGCCGGGT ACAAGCCCGA GCAGTTGCTC ATTCGTTTCG AGGGAGCCAA ATAA
 
Protein sequence
MIKVSCVFPK QKLCHVTKPL LIILAAGLTA CAVQAPPVAQ KDAPQSLATQ KAAQQAVASQ 
APATPTLKRK IALGRITNET SYGQSLLRDR HDDPLGKQVT DLMSKALTES GAYLVFERPD
IGRIQAEGRL TDTKLNIVGV DALIIGSLTE FGRKAIGATG FVSSSKRQVA FAKVDIRVVD
VNTGHVFFAT SGAGEASTET ASTFGFGSQA GYDGTLNDAA IRQAVAEAIN RLSVEMSGRP
WQTYLLKVDG YRVFIGGGKS QGVKPGMQFS VQTQGEQVKS PQTGAMVTLP GQAIAQIRVD
ALFGDSELNE GAVASIASGS LAGYKPEQLL IRFEGAK