Gene Pnap_4671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4671 
Symbol 
ID4685867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp57275 
End bp57910 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content57% 
IMG OID639826666 
Producthypothetical protein 
Protein accessionYP_973829 
Protein GI121583398 
COG category[S] Function unknown 
COG ID[COG4380] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.195271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.101554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTT TCCTCTGCGC TTTGGTGTCG GTGTTCTTGA TGGGCTGCGT TACCCAACCG 
ACCAAAAAAG ACATGAGCGC GTTCCAGGCG GCCGCGCCGC GCTCCATCCT GGTGGTGCCC
ACCATCAACA AGTCGCTCGA TGTCGATGCG CCCAACTACG TGCTGGCAGC CCTGCCGGTT
CCGATTGCGG AAAAAGGCTA CTACGTCTTC CCGGTCAACA CGACCAAGTA CGTGCTTGAG
CAAGAAGGCT ACTACGAGGG GGAGCGCATT CACCAACAGT CGACGCCAAC CCTGGCGAAG
CTGTTTGACG CTGACGCTGT GCTTTATGTG TCGATCAACC GCTGGGATGC GCAATTTGCG
CTGCTCACGA CCGTCGTGAC CGTGGAATTC GATTACCGAC TGGTGAGCAA GGACGGTACC
GAATTATGGA AAGAAAACAA GCGTATGCAG TACCAGCCGC AAAGCAACAA CGCCGGGCAT
CCGTTGGCAA CCTTGATTGT CGCGGTCGTC AACGCCGCCG TCACGCGCGC TGCACCCAAC
TATATGCCGC TGACTCAACA GGCCAATCAG CAGGTTTTTA TTCTTGGACC TGACGCGATT
CCTGATGGGC CGTATCGACC TACAGCCGCA AGGTAA
 
Protein sequence
MRVFLCALVS VFLMGCVTQP TKKDMSAFQA AAPRSILVVP TINKSLDVDA PNYVLAALPV 
PIAEKGYYVF PVNTTKYVLE QEGYYEGERI HQQSTPTLAK LFDADAVLYV SINRWDAQFA
LLTTVVTVEF DYRLVSKDGT ELWKENKRMQ YQPQSNNAGH PLATLIVAVV NAAVTRAAPN
YMPLTQQANQ QVFILGPDAI PDGPYRPTAA R