Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4671 |
Symbol | |
ID | 4685867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008760 |
Strand | - |
Start bp | 57275 |
End bp | 57910 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639826666 |
Product | hypothetical protein |
Protein accession | YP_973829 |
Protein GI | 121583398 |
COG category | [S] Function unknown |
COG ID | [COG4380] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.195271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.101554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTTT TCCTCTGCGC TTTGGTGTCG GTGTTCTTGA TGGGCTGCGT TACCCAACCG ACCAAAAAAG ACATGAGCGC GTTCCAGGCG GCCGCGCCGC GCTCCATCCT GGTGGTGCCC ACCATCAACA AGTCGCTCGA TGTCGATGCG CCCAACTACG TGCTGGCAGC CCTGCCGGTT CCGATTGCGG AAAAAGGCTA CTACGTCTTC CCGGTCAACA CGACCAAGTA CGTGCTTGAG CAAGAAGGCT ACTACGAGGG GGAGCGCATT CACCAACAGT CGACGCCAAC CCTGGCGAAG CTGTTTGACG CTGACGCTGT GCTTTATGTG TCGATCAACC GCTGGGATGC GCAATTTGCG CTGCTCACGA CCGTCGTGAC CGTGGAATTC GATTACCGAC TGGTGAGCAA GGACGGTACC GAATTATGGA AAGAAAACAA GCGTATGCAG TACCAGCCGC AAAGCAACAA CGCCGGGCAT CCGTTGGCAA CCTTGATTGT CGCGGTCGTC AACGCCGCCG TCACGCGCGC TGCACCCAAC TATATGCCGC TGACTCAACA GGCCAATCAG CAGGTTTTTA TTCTTGGACC TGACGCGATT CCTGATGGGC CGTATCGACC TACAGCCGCA AGGTAA
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Protein sequence | MRVFLCALVS VFLMGCVTQP TKKDMSAFQA AAPRSILVVP TINKSLDVDA PNYVLAALPV PIAEKGYYVF PVNTTKYVLE QEGYYEGERI HQQSTPTLAK LFDADAVLYV SINRWDAQFA LLTTVVTVEF DYRLVSKDGT ELWKENKRMQ YQPQSNNAGH PLATLIVAVV NAAVTRAAPN YMPLTQQANQ QVFILGPDAI PDGPYRPTAA R
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