Gene Pnap_4668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4668 
Symbol 
ID4685864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp55316 
End bp55957 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content51% 
IMG OID639826663 
Productstress protein 
Protein accessionYP_973826 
Protein GI121583395 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.568627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.0479179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCT CTCTCAAAAA AGGGCACGGC ATCAGTCTTA AGAAAAATGA GAATGATTTG 
TCCATGGTCA CCATCGGTCT GGGTTGGGAT ATTCAGGAGA AGAAGAAGGG TTTCCTAGGT
GGTATGTTTG GCCCTAAGGA AGAGGAATAT GACCTAGATG TCGTCGCGTT TCTCTGCGGA
GCTGACGGCA AAGTCCAAAA TCTTGGCCGT GACAGCGGCG GCAACGCCAC CCTCATGAAT
GGTGACATCG TCTTTTTTAA CAATATGCAC CACAACTCTG GCCAGATCTG GCTGACGGGT
GACAACCGCA CCGGTGCAGG CGACGGCGAT GATGAGCAAA TCATCGTCAA ACTCAATGAT
TTGCCGCAGC AGTACGCGAA AGTCGTTTTT GTCGTTCAAA TCTACAAGGG GCTTGAGAAC
CAACAGAGCT TTGGCATGGT CAAGAATGCC TTCATCCGGG CCGTCGATGG AAAGAAGCGC
GAGATGGTCC GGTTTGATCT TTCGGGCGGT GCGCCATACG AAAATTGTCG CTCCATGCTC
TTTGCAGAAA TGGTCCGCGA GACGGACGGG TGGAAATTCA ATGCCTTGGG AACACCTTCA
CCATCCGACT CGTTTGTCGA ATGGCTCAAA AAGTTTGCGT GA
 
Protein sequence
MAVSLKKGHG ISLKKNENDL SMVTIGLGWD IQEKKKGFLG GMFGPKEEEY DLDVVAFLCG 
ADGKVQNLGR DSGGNATLMN GDIVFFNNMH HNSGQIWLTG DNRTGAGDGD DEQIIVKLND
LPQQYAKVVF VVQIYKGLEN QQSFGMVKNA FIRAVDGKKR EMVRFDLSGG APYENCRSML
FAEMVRETDG WKFNALGTPS PSDSFVEWLK KFA