| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4667 |
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| Symbol | |
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| ID | 4685863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | - |
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| Start bp | 54668 |
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| End bp | 55309 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639826662 |
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| Product | von Willebrand factor, type A |
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| Protein accession | YP_973825 |
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| Protein GI | 121583394 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.40968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.0500765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCA GACGCCTACC AGTTTATATC TTGCTCGACA CTTCGGGGTC GATGAGAGGT
GAGCCCATCC ACTCGGTCAA TGTGGGACTC CAGGCCATGC TGAGCACCTT GCGGCAAGAC
CCTTACGCGC TGGAAAGCGT CCACCTGTCG ATCATCACCT TTGACACAGA AGCTAGGGTG
CTTCTTGTAC TCACGCCGCT AGACCAAGTG AGCCTTGCCA GCATTGACAT TCCTAACTCT
GGAGCGACTT TCATGGGGGC TGCACTGAAC TTGCTTAATG CCTGTGTAGA TCGGGAAGTC
AGGAAATCGA CTGTGGATAC CAAAGGCGAC TGGCGCCCGC TGGTTTTTCT CATGACCGAT
GGCAGTCCAT CGGACATGCA CGCTTTTCGC GAGGCGATTC CTGAGGTCAA AAGGCGCAAC
TTTGGTACTG TGGTCGCCTG CGCGGCCGGC CCCAAAGCCA AGCAAGTTCA TTTGCTTGAA
CTCACCGATC GAGTGGTCAC GATGGACACC ATGGATGCGG CCGCATTCTC GGGCTTCTTT
AAGTGGGTCT CAGCCAGCGT CGCTATTGGC AGCAGCAGTG CGGGATTGTC AGGGCAGGTT
TCACTGCCAC CGCCGCCGCC AGAGGTTCAA CTGGTTTTTT GA
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| Protein sequence | MSTRRLPVYI LLDTSGSMRG EPIHSVNVGL QAMLSTLRQD PYALESVHLS IITFDTEARV
LLVLTPLDQV SLASIDIPNS GATFMGAALN LLNACVDREV RKSTVDTKGD WRPLVFLMTD
GSPSDMHAFR EAIPEVKRRN FGTVVACAAG PKAKQVHLLE LTDRVVTMDT MDAAAFSGFF
KWVSASVAIG SSSAGLSGQV SLPPPPPEVQ LVF
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