| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4666 |
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| Symbol | |
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| ID | 4685862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | - |
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| Start bp | 53531 |
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| End bp | 54583 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639826661 |
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| Product | von Willebrand factor, type A |
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| Protein accession | YP_973824 |
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| Protein GI | 121583393 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.404551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0464435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGTT TGCCTGTGTT TTTCGTCCTC GACTGTTCCG AGTCCATGGT GGGTGCAAAC
CTAAAAAAAA TGGAAGGTGC CGTCGCTGCG ATTGTCAAAT CGCTGCGCAC CGATCCGCAG
GCGCTGGAAA CTGTCTTTTT CTCAGTGATC GCATTTGCGG GTGTGGCCAG AACCATTGCG
CCGCTGGTTG AAATCGTGTC TTTCTACCCT CCGAAACTTC CTCTCGGCGG TGGCACGAAT
CTGGGATCGG CCTTGGACGC TTTGATGGGT GAAATCGACA GATCAGTGAT CAAAACGACG
GCCGAGCGCA AGGGCGACTG GCGACCCATC ATCTACTTGG TCACCGATGG CCGTCCTACC
GATAACCCGA GTCGAGCAAT TGAACGGTGG AATTCTCACT ATGCCAAAAA GGCAACGCTC
ATCGCCATAG GTCTGGGGCG TTCAGTCGAC TTTACGGCGC TGCGGCGCCT CACCGAGAAT
GTCATTTCCT TTGAAGATAT AAAGGAGAGC GACTTTAAGA AGTTCATTAA CTGGGTGACA
GCTTCCGTAG TAGTGCAAAG CAAAAGCGTC GGAGATGGAA CAGATTTTCA GGGGCTGCGC
ATTCTTGACA AGAGCGTGAT GAAAATCATC ATGGAGCCTC CTTCAACGAT TGCCGATGAA
ACTGTGGTGA CGCTGATCGG CCGGTGCCAA AAAACCAGCC GGCCCTACAT CATCAAATAC
GAGCAAGCTA TGCAAGATGT CGTCATGAAG GACTTCAAGG TCCAGGTTTC CAGGTACGAG
ATTGCCGGCT GCTATCCGCT GGAAGAGGAT TATTTTGAAT GGTCTGATCC GCGCACGGTT
GACCTCAAGG TCAACACCTC GGAGCTATTT GGAGCGCCGG GTTGCCCTCA CTGCGGCGCG
CACACGGCTT TTGCCGTCTG TGGGTGCGGA AAGCTTTTAT GCCTGAACGA TGCAGCGTCA
GTGGTTTGTC CATGGTGTCA AAAAACCGTC TCGTTCTCTT CGCTGGGGCC AGACGATGAA
GGTGGGTTCG AGGTCAGGCG AGGCAGAGGC TGA
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| Protein sequence | MRRLPVFFVL DCSESMVGAN LKKMEGAVAA IVKSLRTDPQ ALETVFFSVI AFAGVARTIA
PLVEIVSFYP PKLPLGGGTN LGSALDALMG EIDRSVIKTT AERKGDWRPI IYLVTDGRPT
DNPSRAIERW NSHYAKKATL IAIGLGRSVD FTALRRLTEN VISFEDIKES DFKKFINWVT
ASVVVQSKSV GDGTDFQGLR ILDKSVMKII MEPPSTIADE TVVTLIGRCQ KTSRPYIIKY
EQAMQDVVMK DFKVQVSRYE IAGCYPLEED YFEWSDPRTV DLKVNTSELF GAPGCPHCGA
HTAFAVCGCG KLLCLNDAAS VVCPWCQKTV SFSSLGPDDE GGFEVRRGRG
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