Gene Pnap_4663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4663 
Symbol 
ID4685859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp48977 
End bp50191 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content60% 
IMG OID639826658 
Productstress protein 
Protein accessionYP_973821 
Protein GI121583390 
COG category[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
[COG4110] Uncharacterized protein involved in stress response 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.298991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGCA CGGGAGCATT TCCCCTCCTG CTGAGCCTGA CCTCGCAGGG CATGGACATC 
GACCTCAGCT GCTTTGGCCT GGACGCCGGT GGCCAGCTCT CCGATGATCG CTACATGGTG
TTCTTCAACC AGAAGTCCTG CCCCGGCGGC GGCGTGACGC TGGACATCGG CAACGGCTCA
GCGACCTTCA CCACCGATGT CTCGCGCCTG CCCGAGTCAA TTCACAAACT GGTGTTCACC
GCCTCCCTCA ACGGCGAAGG AACGATGCGC AAGCTCGGCG CTAGCAGCTT GCGCCTGGGC
AGCACCACTT TTTCCTTTTC AGGCGCCGAC TTCCAGGATG AAAAAGCCGT GATCGTCGGC
GAGATTTACA AGCGCGAGGG TCTGTGGCGC TTTGGCGCGG TCGGCCAAGG TTTCAACGGC
GGCCTGTCCG CGCTACTCAA GCATTTTGGC GGCACCGAGG CGGCGGCTTC TCCCGCCCCG
GCTCCGGCGC TCGCTGCAGC ACCAGCATCA GCACCAGCAT CGGCCCCAGT CCCGGAGACC
CAAAAAGTGT CTTTGTCGAA AATCACGCTC GAAAAGCGCG GCGACAAGAT CTCGCTGGAA
AAAGCTGGCC GCCAGGGCTT TGGCCGCACG CGCGTCAACC TGAACTGGAA TCAGTCCTCC
ACTCCTGCCG CCACCGAGCC CAAGAAACAA GGCTTTCTAA GCCGGGCGAT GGGCAGCGTG
CAGACCCGCT CCAGCGGAGG CATTGACCTA GACCTAGGCT GCATGTTTGA GTTGACAGAC
GGCACGCCCG GCTGCGTGCA GGCGCTGGGT AACAGCTGGG GAAGTTTCAG CCTGCCACCT
TATATTCACC TCGACAGTGA TGATCGCTCT GGCACCAGCA CGGGCGGAGA AAATATCTTT
ATCAACGGTG ACCAGTTCCC CCAGATCAAG CGGGCGTTAA TCTTTACCTT CATCTATGAC
GGTGCGCCAA ACTGGGCCGC CACCAACGGC GTGGTCACCA TCGAGGTACC GGGCCGATCG
CCTGTAGAAG TCAGGCTGGA CAATGGAAGC ACCGCCTCGA TGTGTGCCAT TGCGATGATT
GAGAACAAAA GTGGAAATCT GGAAATCACC AAGCTGGTGG AGTATTTTCA GCAGGTGGGC
CTCAAGAGCA CCCATCAGCA GATCAATGAC CGCTTCCGAT TTGGCCTGCG CTTCAAGGCT
GGAAGCAAGG ATTAA
 
Protein sequence
MGCTGAFPLL LSLTSQGMDI DLSCFGLDAG GQLSDDRYMV FFNQKSCPGG GVTLDIGNGS 
ATFTTDVSRL PESIHKLVFT ASLNGEGTMR KLGASSLRLG STTFSFSGAD FQDEKAVIVG
EIYKREGLWR FGAVGQGFNG GLSALLKHFG GTEAAASPAP APALAAAPAS APASAPVPET
QKVSLSKITL EKRGDKISLE KAGRQGFGRT RVNLNWNQSS TPAATEPKKQ GFLSRAMGSV
QTRSSGGIDL DLGCMFELTD GTPGCVQALG NSWGSFSLPP YIHLDSDDRS GTSTGGENIF
INGDQFPQIK RALIFTFIYD GAPNWAATNG VVTIEVPGRS PVEVRLDNGS TASMCAIAMI
ENKSGNLEIT KLVEYFQQVG LKSTHQQIND RFRFGLRFKA GSKD