Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4663 |
Symbol | |
ID | 4685859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008760 |
Strand | + |
Start bp | 48977 |
End bp | 50191 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639826658 |
Product | stress protein |
Protein accession | YP_973821 |
Protein GI | 121583390 |
COG category | [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 [COG4110] Uncharacterized protein involved in stress response |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.298991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGCA CGGGAGCATT TCCCCTCCTG CTGAGCCTGA CCTCGCAGGG CATGGACATC GACCTCAGCT GCTTTGGCCT GGACGCCGGT GGCCAGCTCT CCGATGATCG CTACATGGTG TTCTTCAACC AGAAGTCCTG CCCCGGCGGC GGCGTGACGC TGGACATCGG CAACGGCTCA GCGACCTTCA CCACCGATGT CTCGCGCCTG CCCGAGTCAA TTCACAAACT GGTGTTCACC GCCTCCCTCA ACGGCGAAGG AACGATGCGC AAGCTCGGCG CTAGCAGCTT GCGCCTGGGC AGCACCACTT TTTCCTTTTC AGGCGCCGAC TTCCAGGATG AAAAAGCCGT GATCGTCGGC GAGATTTACA AGCGCGAGGG TCTGTGGCGC TTTGGCGCGG TCGGCCAAGG TTTCAACGGC GGCCTGTCCG CGCTACTCAA GCATTTTGGC GGCACCGAGG CGGCGGCTTC TCCCGCCCCG GCTCCGGCGC TCGCTGCAGC ACCAGCATCA GCACCAGCAT CGGCCCCAGT CCCGGAGACC CAAAAAGTGT CTTTGTCGAA AATCACGCTC GAAAAGCGCG GCGACAAGAT CTCGCTGGAA AAAGCTGGCC GCCAGGGCTT TGGCCGCACG CGCGTCAACC TGAACTGGAA TCAGTCCTCC ACTCCTGCCG CCACCGAGCC CAAGAAACAA GGCTTTCTAA GCCGGGCGAT GGGCAGCGTG CAGACCCGCT CCAGCGGAGG CATTGACCTA GACCTAGGCT GCATGTTTGA GTTGACAGAC GGCACGCCCG GCTGCGTGCA GGCGCTGGGT AACAGCTGGG GAAGTTTCAG CCTGCCACCT TATATTCACC TCGACAGTGA TGATCGCTCT GGCACCAGCA CGGGCGGAGA AAATATCTTT ATCAACGGTG ACCAGTTCCC CCAGATCAAG CGGGCGTTAA TCTTTACCTT CATCTATGAC GGTGCGCCAA ACTGGGCCGC CACCAACGGC GTGGTCACCA TCGAGGTACC GGGCCGATCG CCTGTAGAAG TCAGGCTGGA CAATGGAAGC ACCGCCTCGA TGTGTGCCAT TGCGATGATT GAGAACAAAA GTGGAAATCT GGAAATCACC AAGCTGGTGG AGTATTTTCA GCAGGTGGGC CTCAAGAGCA CCCATCAGCA GATCAATGAC CGCTTCCGAT TTGGCCTGCG CTTCAAGGCT GGAAGCAAGG ATTAA
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Protein sequence | MGCTGAFPLL LSLTSQGMDI DLSCFGLDAG GQLSDDRYMV FFNQKSCPGG GVTLDIGNGS ATFTTDVSRL PESIHKLVFT ASLNGEGTMR KLGASSLRLG STTFSFSGAD FQDEKAVIVG EIYKREGLWR FGAVGQGFNG GLSALLKHFG GTEAAASPAP APALAAAPAS APASAPVPET QKVSLSKITL EKRGDKISLE KAGRQGFGRT RVNLNWNQSS TPAATEPKKQ GFLSRAMGSV QTRSSGGIDL DLGCMFELTD GTPGCVQALG NSWGSFSLPP YIHLDSDDRS GTSTGGENIF INGDQFPQIK RALIFTFIYD GAPNWAATNG VVTIEVPGRS PVEVRLDNGS TASMCAIAMI ENKSGNLEIT KLVEYFQQVG LKSTHQQIND RFRFGLRFKA GSKD
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