Gene Pnap_4660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4660 
Symbol 
ID4685856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp46149 
End bp46904 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID639826655 
Producthypothetical protein 
Protein accessionYP_973818 
Protein GI121583387 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.808713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.527012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAT TCCTGTTCGT TGACTTGGAC GACACCCTAT TCCAGACGCC AGGCAAATGC 
GCGGACGAAA AAGACCTGCA CCCTGCAGCT TATCTGAAGG ACGGCTCCGT CTGCTCCTTC
TCAACGCCGC GCCAGCGCGC ATTTTTCGCG CTGATGAACA AGGAAATGAC GCTGATTCCA
GCCACGGCGC GCAACCGCGA CGCGCTGAGC CGCGTTGATT TACCGTTTTC CAGCCACGCC
ATCATCGACT ACGGCGGCGT CGTGCTGACC CCCGACGGCG CGCCCGATGG CGAGTGGCTC
GACCTCATGC GCGCAGACAT GGCGCTCGCG CTGGGCGGCC TGAAGGAAGC CATCGACGTG
ATTGACCGCT ATTCGGCCAG CGTGGGTTTA AAAGGCCGCG CCCGCCTGAT CGAAGACTAC
GCCACGCCGT TTTACATCGT CGTCAAGGAT CCAGACAAGC AGGCCGAGCG CTTAGAGAGC
ATCGAGCGCG AAGCCCTGAC GGATTGGATC GCCAGCCCAA CTGGCCAGGA TTTTTACATC
CACCGCAACG GCAACAACTT GGCCGTTCTG CCCAAGGCGC TGAACAAGGC CCGCGCCGTT
CACTATTTAC GCCAGAAGCT GCAGACCGAG CATGGCGACA TCATGACGCT GGGCATGGGC
GACAGTAAAT CCGATGCGCG CTTCATGGCC GCCTGCGACT ACGCCATTGT TCCCAGCGGC
ACCCAGCTCT CGTCCCTGAC GGTGGGGGCG CTATGA
 
Protein sequence
MKKFLFVDLD DTLFQTPGKC ADEKDLHPAA YLKDGSVCSF STPRQRAFFA LMNKEMTLIP 
ATARNRDALS RVDLPFSSHA IIDYGGVVLT PDGAPDGEWL DLMRADMALA LGGLKEAIDV
IDRYSASVGL KGRARLIEDY ATPFYIVVKD PDKQAERLES IEREALTDWI ASPTGQDFYI
HRNGNNLAVL PKALNKARAV HYLRQKLQTE HGDIMTLGMG DSKSDARFMA ACDYAIVPSG
TQLSSLTVGA L