| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4640 |
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| Symbol | |
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| ID | 4685951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | + |
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| Start bp | 27967 |
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| End bp | 30036 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639826636 |
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| Product | recombinase |
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| Protein accession | YP_973799 |
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| Protein GI | 121583368 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCT CTGATCTGTT GCCGGCCGCA GTGCTGCGTC GCAAAGCTGT CGTCTATGTG
CGCCAGTCAA CTCAGTCACA AGTGCAGACC AACCTGGAGA GCCAGCGCCG GCAGTACGAC
CTGGTGGCGC AAGCTCGCCG CCTCGGATTT GCGCAGGTGG AAGTCATCGA CGATGACCTC
GGCCGTTCCG CCAGCGGTAT GGTGGACCGA CCGGGCTTTG AGCGGCTCGT GGCCTGGTTG
TGCGCTGGCG AAGTCGGCGC CGTCTTGTGC TTCGACGCCT CCCGGCTTGC CCGCAATGGA
CGTGACTGGC ACCACCTGCT GGAGCTGTGT GGCCTGGTCG AGGCACGGGT CATTGACCCG
GACGGCGTGT ACGACCCGTG CCGGCCCAAC GACCGTCTGC TGCTGGGCAT GAAGGGCAGT
ATCAGCGAGT TCGAGCTCGG CGTGATCAGG GCAAGGATGT TCGAAGCGGC TCGTGCCAAG
GCGCATCGCG GTGAATTGCG CATCAGTGTC CCCATCGGCT ACGTCTGGCA CCGGCAGATC
GGGTTGGGGT TGGATCCGGA CATGCGCCTG CAGGAGACGA TCCGGTTGAT CTTCGCGCGC
TTTCGCACGC TCGGCAGCGC CAGGCAGGTG ATGCTTTCCC TTGCGGCAGA CGATGTCCAT
TTCCCACGGC CCTCGGACGG CAAGAAGATG GTGAGCTTTG ACTGGACGCC GATCCGCTAC
CGCAACGTGA TCTCGATACT CAAGAATCCC TTCTATGCCG GCGTCTATGC ATACGGCAAG
AGTGAGAAGC GTACGACGCT CGTGCAAGGG CGACTTCGCA AGACCTACAA GCATGGCAAG
CCGCTCGATC GGTGGGACGT GATGATCAAG GATCATCACG AAGCCTACAT CGACTGGGCC
GAGTTCGAAC GTAATCAAAA GCAGCTTGCC GTCAATGCCT ACGGTAAAGT CGATGGAACG
AAGTCCGGGC GCGGTGGCCG GGCGTTGCTC GCGGGAATGC TGTGCTGCGG GCGTTGTGGG
CGGCGCCTGA CGGTGGCGTA TACGGGGCGC GGGGTGCCTC AACCGGTGTA CCGATGTGAC
CGCCCCAATC TTCAGCTCGC TCAGCCGAGA TGCTTCACGT TTGGCGCACG CCGACCCGAC
GAAGCGATTG CCCGGGAGCT GCTGCGCGCT GTGGAGCCCT TGGCCGTCGA GGCGGCATTG
CAGGCTGAGC GGAGGTATAT GCAAGTTCAA GCGGACCAGC GACGAATCGT GGAGCTGGAG
TTGCAGCAGG CCCGTTACGA GGCTGGTTTG GCAGAGCGCC GCTACGCGGC CTGTGACCCA
GACCATCGCT TGATTGCCGC ACAACTGGAG AAGAGCTGGG AGGCTGCTTT GCAGCGCGTG
CTCGCCTGTG AGCAGCGCTT GAACGTGGCC CGGCAGGTGC AGTCCTCTGC CAGGCCCGAC
TTGACCGGCT TGGAGGAAGA TCTCGCGGCC GCGTGGGATG CGCCGGGCGT GACCATGCGC
GCGCGCCAGC AGTTGCTGCG CACACTCGTC AAGGACATCG TTGCCGATGT CGACGACCAG
GCCCGCGAGG TCGTGCTGAC GATTCACTGG CGCGGAGGCC AGCATTCGCA GGTGAGGGTC
GTCAAGCCAC GCACAGGCGA GCACGGCTGC CGCACGCCCG ATGAAGCCCT GGCCGTCATG
CGCAGCATGG CAGGCAAGTG GTCTGACGAG CACATCGCCG CGACGCTCAA TCGCATGGGA
CTGCCCACGG GCCAGGCCAA GACGTGGACC GCGCATCGCG TGAGCTCCGT GCGCAGGGTC
AACGACATCC ATGCGTACCG CTCGGCCGAG AAGGACGGGC AGTGGTTGAC CATGTCAGAA
GCGGCTGCCA AGCTCGGGGT CAACAACCAC CGCATTCGGC GCCTGATCAA GGAGGGATTG
CTGCCGGCCG AACAGGTGGT GCCGCGGGCG CCGTATCAGA TTCGGGCCAG CGACCTGCTC
GAGCAGCGGG TGATTGACGC CATCGCGCGA ACACTCAGCC CGTGTCGGGC CGTCAGCGAG
AAGCAGATGT CAATGTTTTC AAGCACTTAA
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| Protein sequence | MTTSDLLPAA VLRRKAVVYV RQSTQSQVQT NLESQRRQYD LVAQARRLGF AQVEVIDDDL
GRSASGMVDR PGFERLVAWL CAGEVGAVLC FDASRLARNG RDWHHLLELC GLVEARVIDP
DGVYDPCRPN DRLLLGMKGS ISEFELGVIR ARMFEAARAK AHRGELRISV PIGYVWHRQI
GLGLDPDMRL QETIRLIFAR FRTLGSARQV MLSLAADDVH FPRPSDGKKM VSFDWTPIRY
RNVISILKNP FYAGVYAYGK SEKRTTLVQG RLRKTYKHGK PLDRWDVMIK DHHEAYIDWA
EFERNQKQLA VNAYGKVDGT KSGRGGRALL AGMLCCGRCG RRLTVAYTGR GVPQPVYRCD
RPNLQLAQPR CFTFGARRPD EAIARELLRA VEPLAVEAAL QAERRYMQVQ ADQRRIVELE
LQQARYEAGL AERRYAACDP DHRLIAAQLE KSWEAALQRV LACEQRLNVA RQVQSSARPD
LTGLEEDLAA AWDAPGVTMR ARQQLLRTLV KDIVADVDDQ AREVVLTIHW RGGQHSQVRV
VKPRTGEHGC RTPDEALAVM RSMAGKWSDE HIAATLNRMG LPTGQAKTWT AHRVSSVRRV
NDIHAYRSAE KDGQWLTMSE AAAKLGVNNH RIRRLIKEGL LPAEQVVPRA PYQIRASDLL
EQRVIDAIAR TLSPCRAVSE KQMSMFSST
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