| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4628 |
|---|
| Symbol | |
|---|
| ID | 4685828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008760 |
|---|
| Strand | - |
|---|
| Start bp | 16736 |
|---|
| End bp | 17203 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639826628 |
|---|
| Product | hemerythrin-like metal-binding protein |
|---|
| Protein accession | YP_973791 |
|---|
| Protein GI | 121583360 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2703] Hemerythrin |
|---|
| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT CAAGCGCGGC AGTCGCATAT TTTTGGGAAG ACAAGTTGCT CATTGGTCAC
GAGCAAATGG ATGACGAACA CCAGGCGTTC GCTCACATCA TTCAGGCGCT ACTGAAAGCG
CCTGATAACG CCATCGCTTC ATGTCTAGCG GATGTCATTG CGCACGCGAC TCAGCATTTC
GCGCAAGAGG ACGAATGGAT GTGCAACTTG GACTTTCCTG CTCGGCAGTG CCACATGGAT
GAGCACGCTG CGGTGCTGCG ATCTGCGGCC GGTGTGAAAT TGCGCGTTCA CGCCGGCGAC
CACCAAGCCG CACGCCTGTT TTCACAGGAG TTGGCCGCGT GGCTTCCTCC CCATGTGCAG
CACCTCGATT CGGCCTTGGC CGCCTGGATT TGCAAATTGG CGTGGAACGC CAAGCCATTG
GTGTTTCACC GACAAAGCCG CACCCGCGCG GCAACTGCAA TCGCGTAA
|
|---|
| Protein sequence | MMKSSAAVAY FWEDKLLIGH EQMDDEHQAF AHIIQALLKA PDNAIASCLA DVIAHATQHF
AQEDEWMCNL DFPARQCHMD EHAAVLRSAA GVKLRVHAGD HQAARLFSQE LAAWLPPHVQ
HLDSALAAWI CKLAWNAKPL VFHRQSRTRA ATAIA
|
|---|
| |