Gene Pnap_4624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4624 
Symbol 
ID4685824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp12359 
End bp13327 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content58% 
IMG OID639826624 
Productferredoxin 
Protein accessionYP_973787 
Protein GI121583356 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCAC AAACCCACGC TGACACCCAG ATGCCGCTGC GTGTCGATCG CGCCTACGAC 
GTGGCTCAAG GCCTTCGTTC ATTTGAACTT GTTTTGCCCG ATGGAGTCGA GCTGCCGGCT
TTCACGCCTG GCTCTCACGT AAAGGTGCAA ACGCCCAGCG GTCTGCTGCG CAAATACTCG
TTGTGTAATG CGCCTGATGA GCGCCATCGC TACGTCATTA CGGTGAAGCG GGAGGAAGCC
AGCCGTGGCG GCTCGGCTAG CATGCACGAC GACGTCAAGG TCGGCGACAT CCTCCCCACC
TCGGTGCCGG AAAATGCGTT CCCCTTGGTC GACAACGCTA AGTCGTACCT GTTCATTGCG
GGTGGAATCG GCATCACCCC GATGTTGTCC ATGATCCGTT CATTCGGTGA CGATGCACCG
GCACCGTGGA AGCTGATCTA CCTCTCGCGT TTTGCTGAGA ACACCGCATT TCTCGACGAG
TTGGGCCGGC CAGAGCTGAA GAAGAACGTC AAGATCCACC ACAGCGAGGG CAGTCCCGAC
CAGCAGTTTG ACCTTTGGCC CGCGCTGGAA AAGCCAAACA CCGCACATGT TTATTGCTGC
GGTCCGCGTG GCCTGATGGA AGCGGTGCGC GACATGACGG GCCACTGGTC GCCGAAGAAT
GTGCATTTTG AAAGCTTTGA CGAAGGTGGC AAAACACTGC CCGATGACAA GCCGTTCACG
GTGAGGATGG CGCGCACTGG ACAACGTTTT GAGGTGCCGG TCGGGGTTTC CATTTTGAAC
GCCATGCGGG AACACGGCTG CAACAGTGCT TCGTCCTGCG AAAGCGGAAC CTGTGGCACT
TGCCGCACCG GCCTGCTGGA AGGCCAAGCC GACCACCGCG ACATGGTTCT GATGCCCGAA
GAGATGGACA CCCAGATCAT GATCTGTGTG TCGCGCGCCA AGTCGGCTGA ACTCGTATTG
GATCTTTGA
 
Protein sequence
MIPQTHADTQ MPLRVDRAYD VAQGLRSFEL VLPDGVELPA FTPGSHVKVQ TPSGLLRKYS 
LCNAPDERHR YVITVKREEA SRGGSASMHD DVKVGDILPT SVPENAFPLV DNAKSYLFIA
GGIGITPMLS MIRSFGDDAP APWKLIYLSR FAENTAFLDE LGRPELKKNV KIHHSEGSPD
QQFDLWPALE KPNTAHVYCC GPRGLMEAVR DMTGHWSPKN VHFESFDEGG KTLPDDKPFT
VRMARTGQRF EVPVGVSILN AMREHGCNSA SSCESGTCGT CRTGLLEGQA DHRDMVLMPE
EMDTQIMICV SRAKSAELVL DL