Gene Pnap_4622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4622 
Symbol 
ID4685822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp10265 
End bp10789 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content56% 
IMG OID639826622 
ProductMarR family transcriptional regulator 
Protein accessionYP_973785 
Protein GI121583354 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCA AGCCCATTAC CCGGAACAAA CCAGGCGTCG AAGATCGTGT ACTCAAGCAC 
TGGCATGCAG CGGTGCCCAA TGACCGCATG GCGCACTTGA TCAAGGATGC GACTCGGGTA
TTTCTTCGTT CACTCCAGGT GCGTTTGGCC AGGCATGATG TCCAACTGGG GCATTGGAGT
TTTCTGCGGA TACTTTGGGA GCAAGATGGC CTGACACAGC GTGAACTGAG CGACGAGGCG
GGTTTTATGG AGCCGACAAC CGTGATTGCT TTACGCTCGA TGGAGTCGCT CGGTTATGTC
ACCCGTGAGC ATCGGCCCGA CAATCGCAAG AACCTGTACG TTTTTCTGAC GCCGAAAGGA
AGGCGCTTGA AGCAAGCACT GGTCCCGTTG GCGGAAGAGG TCAATGCCGT TGCTTTGACT
GGTTTGTCTG ACGGCGATGT TGCGGCTACG CGTCGGGCGT TGTTGGCCAT GATTGACAAC
CTCTCACAGG ACCCAGCCAT CACGGACGGC TCAAAGGGTA TGTGA
 
Protein sequence
MMTKPITRNK PGVEDRVLKH WHAAVPNDRM AHLIKDATRV FLRSLQVRLA RHDVQLGHWS 
FLRILWEQDG LTQRELSDEA GFMEPTTVIA LRSMESLGYV TREHRPDNRK NLYVFLTPKG
RRLKQALVPL AEEVNAVALT GLSDGDVAAT RRALLAMIDN LSQDPAITDG SKGM