Gene Pnap_4615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4615 
Symbol 
ID4685816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp4080 
End bp5042 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content64% 
IMG OID639826616 
Producthypothetical protein 
Protein accessionYP_973779 
Protein GI121583348 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTC GTTCGCTTCT GTCCGCCGCC GTCCTGGGCA TCGGCGTCCT CACTGCATTG 
GCCAGCCCGG CCTGGGCCGA TGCCGCCTAC CCCAACCATC CTGTCCAGCT AGTCATTCCC
TTCCCGCCTG GCGGTGCGAC GGACGTGGTG GGCCGCCTGA TCGGCAAGAC GCTAGGCGAG
AAGCTCGGCC AGCCGGTTGT GGCCGACAAC CGCGCCGGCG CTGGCACCAT CATCGGCGCC
ACCTACGTGT CGAAGGCTGC GCCGGACGGC TATACGCTCT TGATCAGCTC GGGCACGACG
TTCACCGTCA ATCCCGCTAT TCAGCCCAAG CTGGCCTACG ACCCGGTCAA GAGCTTCGAG
CCGATCGGCC TGATCCTGCT GGCGCACAAG GATGTGCCGG TCAACAACCC CAAGGAATTC
GTCGCCGCCG CCAAGGCCGA GCCCGGCAAG TATTCTTATG CGTCCTTCGG TACCGGCACC
ACGTCGCAAT TCACCGGCGA GTTGATCCTG CACACCACTG GCACGAAGCT CGTTCACATT
CCCTACAAGG GCAGTGCTCC GACCATGACC GACCTCATGG GCGGGCAGGT GCCGTTTTCG
GTGGATACCA TCTCGGCCGC CATTGCGCAA CTGAAGACGG GCAAGATCAA GGCGATTGCC
GTCACCACCG CCAAACGCTC GGCGCTGCTG CCCAACGTGC CGACCTTCGC CGAAAGCGGA
TTCAATATGG ATGCAGACAC GTGGATCGCC ATCGTCGCGC CGCGCGGCCT GCCGCCAGCA
GTCCGGGCAC GTCTGGAAAA GGCACTCGCC GACACGGTCG CAGTTCCAGA AGTGCAGGCG
AAGCTGATTG GCGCGGGCCT TGAGCCGGGC TTTCAGAGCG GTGCCGCTGT GAGTGCCATG
ATCGAAAAGG AACTACCGCT GATGCGCGCC ATCGCGCAGC GTGCCAACAT CAAGGCCGAA
TGA
 
Protein sequence
MKSRSLLSAA VLGIGVLTAL ASPAWADAAY PNHPVQLVIP FPPGGATDVV GRLIGKTLGE 
KLGQPVVADN RAGAGTIIGA TYVSKAAPDG YTLLISSGTT FTVNPAIQPK LAYDPVKSFE
PIGLILLAHK DVPVNNPKEF VAAAKAEPGK YSYASFGTGT TSQFTGELIL HTTGTKLVHI
PYKGSAPTMT DLMGGQVPFS VDTISAAIAQ LKTGKIKAIA VTTAKRSALL PNVPTFAESG
FNMDADTWIA IVAPRGLPPA VRARLEKALA DTVAVPEVQA KLIGAGLEPG FQSGAAVSAM
IEKELPLMRA IAQRANIKAE