Gene Pnap_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4955 
Symbol 
ID4685780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp148844 
End bp149683 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content53% 
IMG OID639826595 
Productprotein kinase 
Protein accessionYP_973758 
Protein GI121583322 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.230313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CTCCCGACTT AGCCGCAGCC GCAGCCGCCC TGTGCAAACA GCGTAACTTT 
GAGTTCTGCG GTGACTTGGG CAAGGGAGCA TTCAAAAGTG CTTACCTGGC TAAGACTGGC
AACGATGCAT TCGCGCTGAA ACTTGCAGTA GTAAGCGGGT CTCCAGAACG ACTCATACGA
GAGACAGCCG CTTTGCAGGG TTGCTCGCAT CCTAGCATTG CTCGCGTGCT CGAAGCGTTT
CCTTACCAAT ACGAAGCGCT TACCATGTGG GTCGTCATGG AAGAGTTCTT GGACGGCGGG
ACCTTGGAGC AGCACTTAAA GAGTGGCCCG CTTTCACCAG AAATGGTTCG CGCGATTGGC
CTGTCTTTGG CGGAGGTACT GGAGCATCTG CATGAGCGTC GGCTAGTGCA CCGCGACATT
AAGCCTGCCA ACATATTGTT CCGAGGGGGC GTACCAGTGC TTACTGATTT TGGCATTGTA
CGTATGCTCG ACCAACCGTC GCTAACACAT GCGTTCCTTG CGATGGGGCC AGGGACACCG
GCTTATGCGG CTCCAGAGCA GCTCACAAAC GAGAAGGCGC TCATCGATTG GAGAACAGAC
CAATTTGGCC TTGCCATCGT TCTCTCGGAG TGTCTAACCG GTCACCATCC ATATTTGGAG
ACTGGTAGGT CCATCCATGA GGCAATTTTG GCTCTGTCAG CAAAACAAGA GATACCGCAT
TCATCACGAG ATGAACTCGT TAGGTTGGGC TTTAGTTCTT TAGTGCAGGC ATTAAAACCT
TGGCCTATTG CAAGGTATCG CAAGCCGGCA CACCTCATCA ATGCATTAAA ACAAACCTGA
 
Protein sequence
MSGAPDLAAA AAALCKQRNF EFCGDLGKGA FKSAYLAKTG NDAFALKLAV VSGSPERLIR 
ETAALQGCSH PSIARVLEAF PYQYEALTMW VVMEEFLDGG TLEQHLKSGP LSPEMVRAIG
LSLAEVLEHL HERRLVHRDI KPANILFRGG VPVLTDFGIV RMLDQPSLTH AFLAMGPGTP
AYAAPEQLTN EKALIDWRTD QFGLAIVLSE CLTGHHPYLE TGRSIHEAIL ALSAKQEIPH
SSRDELVRLG FSSLVQALKP WPIARYRKPA HLINALKQT