| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4938 |
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| Symbol | |
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| ID | 4685734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | + |
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| Start bp | 134639 |
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| End bp | 136054 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639826578 |
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| Product | initiator RepB protein |
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| Protein accession | YP_973742 |
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| Protein GI | 121583306 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.213159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.519061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATG CTCGACAGTC CGATGCACAC CAGCTTGCGC TGGCCTTGTT TGAAGATTTC
GCTCCCTTGA GCAAAAGCAT CGCAGACGCG CCAGCAGAAA TCGGCTTCAG CCGAAATAAT
ATTTTTGTGG AGATTGAAGA CCTCAGCTTG GCCACTCGTC GGGCGTTGGA TGCGGCCTAT
TTCATCGTTT CACAAAAAGA AGCTGTTTGC AAAACCTACG AGGTGGACCT TAACTTTTTT
CAATGGCTGA TGGCTTACAG CAGCAGCAAT CGAAAGCATT TTCGGGCTCT GATGGTTGAA
GCGCAAAAGG CGGTTATCCA AGTACAGGAC ACAGACCCCG ATGACGACCA GGACGATAGG
TGGGGCGCCG TCCAAATGCT GGGCGCCGTC AAGATTTATA AGGGCAAGAT TGTCTTTGAG
GTGCATGACT CGTTGCAGCG GGCCATCAAA AATCCGGTCA GCTCGCATTT CTTGAGCTTG
CGGCTAATCT TCAGCTCCCT GCATGCCAAA ATTTTGCATG ACCGGCTCTT GCCAGTTGTG
ACCGAAGGGG GTACCCCTTG GATTCCGATT CAAGAGCTGC GGCGCTGGCT GAGTTGCACT
ACCAAGACCT ACGATGAGTT CAAGTACATC AAACGCGATG TGCTGGAGCC TGCCATCAAG
CAAATTAACA GCCTGTCGTC CATCGCGGTC AGCCTGGACA CCCGCAATCT GCCTGGCACC
AAAAAAATAG GGGAAGTGCG CTTTCGCGTG AAGGCCGACC AGCATGGCAC AGCATCAATG
GCGCCTATGC TGGTGTTAAA AGAACTGTAC GACATTTTGA ACGACGAGAT TGGGCTGTCC
ACGGCCCAGT TTAGCGAGAT TATTTCCAAC CGGGAAGCAT GGACGGATGC GCGTATCCGG
CAAGCTTTGG AATACACCCG ATTCAGCTTT CGGAGAGGAA AGGTAAACCG TAGTGTCTCT
GGCTTTTTTA TGCGCGCGCT CAAAGACGGC TATAACGTCG GCAGTGCGGA CTTGGCTCTT
TTAGAGGGGG GCGCCAATCC GAGCGGGGTT GAACCCTGCG CAGCCGCCGA GGTCGGCGCC
GTGAAAAATA CGTTCGAAGT GCACCTCGCC CGCCAGGAAG CAGCAGAGGC CCGGCGCGTT
GAGGACGTAA CTCAGCGCGG AATGGACTTA TTCCAGGCTT TAGACACGCA AGGGCAGCAG
CAGGCACTTC AAGCATTCAG TCAGACCTCG CCGGCCAAGG TTATTGCTAC GCGAACCAAG
ACCGAAGTGC AAGCCTTGGG CACGCTGGTG GAAGACAACC TGTGGATGCG CAGGGCCCTT
GGCTCGTTTA TGCTGGAAGG GGGCGAGAAG CCCTCCGTAA AGCGTCGGGC TGCCCGACCG
GCAACGGATG GGACGGCGCC TTATTTGGCT CGGTAG
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| Protein sequence | MTNARQSDAH QLALALFEDF APLSKSIADA PAEIGFSRNN IFVEIEDLSL ATRRALDAAY
FIVSQKEAVC KTYEVDLNFF QWLMAYSSSN RKHFRALMVE AQKAVIQVQD TDPDDDQDDR
WGAVQMLGAV KIYKGKIVFE VHDSLQRAIK NPVSSHFLSL RLIFSSLHAK ILHDRLLPVV
TEGGTPWIPI QELRRWLSCT TKTYDEFKYI KRDVLEPAIK QINSLSSIAV SLDTRNLPGT
KKIGEVRFRV KADQHGTASM APMLVLKELY DILNDEIGLS TAQFSEIISN REAWTDARIR
QALEYTRFSF RRGKVNRSVS GFFMRALKDG YNVGSADLAL LEGGANPSGV EPCAAAEVGA
VKNTFEVHLA RQEAAEARRV EDVTQRGMDL FQALDTQGQQ QALQAFSQTS PAKVIATRTK
TEVQALGTLV EDNLWMRRAL GSFMLEGGEK PSVKRRAARP ATDGTAPYLA R
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