| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4937 |
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| Symbol | |
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| ID | 4685733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | + |
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| Start bp | 133149 |
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| End bp | 133856 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639826577 |
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| Product | transposase, IS4 family protein |
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| Protein accession | YP_973741 |
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| Protein GI | 121583305 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3293] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00831349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.350186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATG GCAGCGTATC GAGCCGCTCA TGCCCCCTTG CAAGGGCCGC CCCGGCGGGG
CGCCTAGGGA AGTTTTTCGA TGCCCTTCTG TGGATGGCCC GCACGGGCGC TGCCTGGCGC
GACTTGCCCG AGCAGCTGGG AAAGTGGAAT GTGGTGTACC AGAGCTACGC CTACTGGTGC
GGCAAAGGCC ATTTCGAGCG CTTTTTCCAG GGCGTGCAGC AGCCCGACCT GGAAGAGGTT
ATGGTGGATT CGACCTGCTG CCGGGCGCAC CAGTCCTCGG CATGCGCCCG AAAAACAAGT
CGCCCGCAAG TCATCGGTAT CACGCGCGGC GGGCTCAACA CCAAAATTCA CGCCGTCTGC
GATGCGCTGG GCAACCCGCT GCGCTTTGTG CTGACCCCGG GCCAGAGGCA CGACTCCAAA
CCGGTTCCTG AGTTGCTCGA GGGGCTGCAG GCCAAGGCGC TTTTGGCTGA CAAGGCATAC
GACTCGGACA AAATGGTCCA GGCTGCACAA AAGCAGGGCA TGGAGGTCCT CATCGCCTGC
CGGGTCAACC GCAAAAAGAA CCAGCGCGTC CAGCACACGC ACCGCTACAA GGCTCGCCAT
CTGATGGAAA ACCTTTTCCA GCGCATGAAG GTCTTTCGCC GCGTAGCTAC CCGCTATGAC
AAGCTCGGCG TCACGTTTCT GGGCTTTGTG CACATCGCGG CACCATGA
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| Protein sequence | MRNGSVSSRS CPLARAAPAG RLGKFFDALL WMARTGAAWR DLPEQLGKWN VVYQSYAYWC
GKGHFERFFQ GVQQPDLEEV MVDSTCCRAH QSSACARKTS RPQVIGITRG GLNTKIHAVC
DALGNPLRFV LTPGQRHDSK PVPELLEGLQ AKALLADKAY DSDKMVQAAQ KQGMEVLIAC
RVNRKKNQRV QHTHRYKARH LMENLFQRMK VFRRVATRYD KLGVTFLGFV HIAAP
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