| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4932 |
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| Symbol | |
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| ID | 4685731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | + |
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| Start bp | 126462 |
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| End bp | 128318 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639826573 |
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| Product | phage integrase family protein |
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| Protein accession | YP_973737 |
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| Protein GI | 121583301 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.356622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCCAGC ACAATGTCGT TGCCATCGCT CCGCAGCGCT ACACGCGCGC CGATTTCGCG
GCGCTGCGCG CACGCCTCAA CAAAATCCCC ACGGCCACCA TCGTGCGCCT GTATTTCACC
GAAGACGCCC TTGACACCCT GCACTGCCCC ACCCCAGCAT TGCTCGAAAA ACGCATCGAC
GCCCTGCGCG ACCACCTAGT CCAGCGCCTC TCGCTCAGCG CCCCCACGCT CAGCGAGCAC
TTGGCCAACG CCCGCAAGTT TCATAGCTGG CCCAAAAGTC TCATCGACTA CTTGGTGAAC
GCGGCCGAAG CGGACAGCGC GGCGCCTCGC TTGGGCGATG CCGTTTCGGT GTGGTTCAAG
CCGCCCGTGG CCCGCGCGCT GCAGGCCGAG GGCATGCATT GCCTGGGCGA GTTTCGGCAG
TACGTGCTCG TGCGTGGCCC GGGCTGGTAC CGACCGGTGG CGCGCATCGG CCAGGGCAAG
GCGCGCGCGC TGGAGCGCTG GCTGGCGGTC CAGCCCACGC TGGGCGGCCT TGTAATGCCC
GCCGAAAGCG TGGTGGGCGG CGAAAGGATT GAACTCGCGA GCGCCAGCGA CATCGCGCCG
CTCGAGCGCA TCGGCGCCAT CACCGCTAAG CTTTCGGGTG CGCAAGGTCT GAACCGAAGC
GGCCGGTTCT GCCTAGTCTC GGCGCGCAAC GACCTCGAAG CCATCCAGGC GTACCTGTAC
CGCTACCGGG ACCGGGACAA GACGCACCGC GCGTACCAAA AAGAGCTCGA ACGCTTTTTG
CTCTGGTGCG TCATCGAGCG CCGGGTAGCG CTCTCGAGTG TTCTGACGGA CGACTGCGAA
GCGTACAAGG ATTTTTTGGC GAAGATACCC GGCCACTGGG TAGGCGCCAA GGCAGCGAGA
AACTCCGCGC GCTGGCGCCC CTTCCTGGGG GCGCTGGAGC CGGCCTCGCA GCGCTACGCT
GTCATCGTCA TCCGCGCGTG TTTTGCCTGG CTTGTGCAGG TGCGCTACCT GGGCGGCAAC
CCGTGGGTGA CCGTGGCCGA CCCGTGCGTG GCCCACAAGG AAATAGCGCT CGATATCGAC
AAGGCGCTGC CCGAGGCGCT GTGGCAGGCG CTCACCGGCA GTGGCGGGCT GCTGGACCAG
GCGTGCGCGG GCGATGCGCC AGCCGCGACG CTGCAGGCGG GGCCGCGCGC CGCGGGCATG
GCGCTGGCGC AGTGGCGCCT GGCGCGCGCG GCCATCTTGC TGCTGGGCAG CAGTGGCCTG
CGCCGCGAGG AGCTCGCTGG TGCCACGCGC AGCCGACTCA AGCGCGTGCC CGAGGAGACA
GGCGCCGGGC TCTGGGAATT GTCCATCCTG GGCAAGCGCA ACAAGTGGCG CACCGTCTGG
CTGCCAGGCA GCGTCGTGGA GAGCGTGCGC GCGCACTGGG CCGACCGCGG GCACGACTTT
GACACAGCCA GCATCCCTGG CTCGTCGGCC GACCTGGCGC TCTTATCGCC CGTGGCCCTG
CCCCCCCTGG CGCCGGCCCG ACGCAAGCAC GCCGGCGCTG GCGGGCACGA GGCACCCACG
GGCCTGAGCG GGGCGGGCTT TACGCCCAAT GGCCTTTACC ACCTAGTCAA GACGGCGCTG
GCGCGCCTGG CACTCAGCCC GCACGCTGCG CTCAGCCAGG CCGAGCGCAG TGTCTTGAGC
CGCGCCGCGC CGCACGCGCT GCGCCACACG TTTGCCACCC GGGCGGCGGC CGGGACCATG
CCCCTGGACG TGCTCCAGCG CCTCCTAGGG CACGCGTCGA GCCAGACAAC CTCCATATAT
GTGCGCGCCG AGCGCACACG CAGCCTGGAC GAGGCAAAAA AGTTCTTTGC CCGCTAG
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| Protein sequence | MAQHNVVAIA PQRYTRADFA ALRARLNKIP TATIVRLYFT EDALDTLHCP TPALLEKRID
ALRDHLVQRL SLSAPTLSEH LANARKFHSW PKSLIDYLVN AAEADSAAPR LGDAVSVWFK
PPVARALQAE GMHCLGEFRQ YVLVRGPGWY RPVARIGQGK ARALERWLAV QPTLGGLVMP
AESVVGGERI ELASASDIAP LERIGAITAK LSGAQGLNRS GRFCLVSARN DLEAIQAYLY
RYRDRDKTHR AYQKELERFL LWCVIERRVA LSSVLTDDCE AYKDFLAKIP GHWVGAKAAR
NSARWRPFLG ALEPASQRYA VIVIRACFAW LVQVRYLGGN PWVTVADPCV AHKEIALDID
KALPEALWQA LTGSGGLLDQ ACAGDAPAAT LQAGPRAAGM ALAQWRLARA AILLLGSSGL
RREELAGATR SRLKRVPEET GAGLWELSIL GKRNKWRTVW LPGSVVESVR AHWADRGHDF
DTASIPGSSA DLALLSPVAL PPLAPARRKH AGAGGHEAPT GLSGAGFTPN GLYHLVKTAL
ARLALSPHAA LSQAERSVLS RAAPHALRHT FATRAAAGTM PLDVLQRLLG HASSQTTSIY
VRAERTRSLD EAKKFFAR
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