| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4912 |
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| Symbol | |
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| ID | 4685758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | + |
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| Start bp | 94028 |
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| End bp | 98260 |
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| Gene Length | 4233 bp |
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| Protein Length | 1410 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639826554 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_973718 |
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| Protein GI | 121583282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.939232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.678438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACT TGTTAATGCG TGCCGACCCG CTGACGATTT CAACAGCGCT GAAAGAAGCC
GTTGTGGACG CTTTGGTGAA CCTGACGTTT CAGCGCATCA GCGGGCACGG CCCCGAAGGC
AGCATCCTTT TCGGGGCCCG GCCTCGCGCT TTGCTGAGCT CGGCCTTTTT ACTGCCTGTG
CCCGCCGGCG CGGCGGGAGG TGACGAGGTC ACCCAGCCCA TTCAAATCTG TGCCCATGGC
TTGGACTTTC AGGTTAGCAC GTCCAGGCAG GGGCCTGTCG TTGTCCAGCC CCGCCTACAG
GTTTACGTGC GGGTCTTGCC TTCGGTGGAG GACATGGCCC GGCCCGACTG CGTCCTGCGC
TTTCGCCTGA ACGATGTCAC GCGCCGGGAC CTTCAGGCCA AGGTGTCTGC CGCGTTGAAA
GCAAAGTGGG CTGAGATGAT GGGCACGTAC AAGCGCCGGG TGGACCACCC CGGCTGGAAG
ACGGCCGAGG ACGAAATCCG CACGCGGATT CACGCGGATT TAGGCTTGCC ACGGGACCTG
AAAACGCTTT TCAGCGAAGA ACCGGAGGAT GCGTCTGATG AAGAAGGGGC CAGCGCAAAT
GTGGCGGAAG ATGGCGCGGC GGAAGAAGGG TTCACGGTGC CGGGGGCCTC AGCCCCAGAG
CTTACCCTCA AGGATTCCCA GTTCCAGCCC ATGGACATTC CGCACAAGTG GCTCCGGCTG
CCTTTGCCGC AGGATGCCCT GCCGACTTTC ATCCTGGACC CCCAGCAGGA CAAGAGCGGG
TTGCGCGAAG CTTGTGAACT GGCGGCCAGC GCGCTCAACG GCGCCATCGG TACGGCTCTG
CTGGCGTGGG CGACGAGTCC AGAGGGGCTG GCCTGGGGCT TTCGCACGGG CATCAAAGTC
TATCCGTCTG AATACAAGGG ATGGGCAGCA TTCTTGGAAA AAGTACGTGC GTCGGGCAAA
CCCGTCGCCT TGCCTGCGAT TAAGCTAGGG TGGGACGCCC GTGTCTCGCC AGATTGGCTG
GACCCCGCGC GCGCCAGCGT CCATGTGTCG CTGGAGAATC GTTCGGAGCC TCCGAAGAAG
AATCGCGACG AGACGGACGA TGCGGTGTTT CAGGTGGACG TTACCGCGAC CTTGCCACGC
GCGCTGCACC GACCGCTCAA ACTCGGGCGG GTCGAGGCGT CCTACCGCTA CAACAAGTAC
CTGGACTACC CCGCCACCGG CTTTAACGGC GGCGTTGAGG TTCTGCACAG TGAGAACCCC
CAGGTGCTGA CGCTGCGCAC GACCTGGTCG CCTCGCTACA CCCAGCCGCG GATTGTTCCC
AAGTCATACA CCGCGGTGAA CCCGCACATC CGGGCTTTGA GCGAACCGCA AGGCCTGGCC
GGCTTGCTTC TCTTGGGCGA GGAGCTCGAT GCCTGGCTGG CGACACTGCC CAGCAAGGTG
CATCTCCAGG AGGGCCTCTC GGCAGATGAC GTCCCCGGCC TGCTGCGCGA GCAAGGCGGC
TTTGCCGCAG ACACAGAGTC CTGGAAGAAG GAAATCCAAG CCATTCATGC AGGCCTTCGA
ATCCTGAAGG AGTCCAAGGC CGAGTGGGAC AAGACCAAGA AGCGGGGGCC GCAGTCGAGC
GACAAGGCCG CGGTCTATGA GGCCTGGCTC GCCATGAACG AAACCATGGC CGAGCTGATG
AAGGAGAAGC TTCCCGATGA CAGCGGCGCC TGGCGTTTGT TTCAGATTGC CTTTATCGTG
GCCAACGTGC CAGCCATTGC GAGCCGAATG AAGTGTTTTG GTCATGAGTT CGACAGGGAG
CGGGACGACA CGGTGACCTT GCTGTACTTC GCAACGGGCG GGGGCAAATC CGAGGCGTTT
TTCGGACTCC TGGTGCTCAA CCTGTTCTTT GACCGCTTGA GGGGGAAAAA GACGGGCGTG
ACCGCCATGC TGCGCTATCC GCTGCGCTTG CTCACCATCC AGCAAGCCCA GCGCTGCGCC
CGGGTCCTGG CCAAGGCCGA GCTGGTCCGC CGCAAGCACG GGCATGGCGG CGACGCGTTT
GCCCTTGGCT TTTGGGTCGG CAGCGGCGGC TCTCCCAATC ACCCCGGCGC ACCCGGCATG
GACCTCATCC CCCCCGTGGA GAAGGAGCCC CCTACCGCCA AAGGTGAAGC TGCGCTGCTG
CAGACCGACG TGAACTACGA GCTGCAAAAA GCTGCCTGGA ACAAAATTCC GAACTGCCCC
TTTTGCAAGG CTGACACCGC CCTGCGCCTG TTCCCGGCGC TCGGAGGCAC GCTGGCGCAT
GTCTGTACCA GCGCCAGCTG CGCTTCAAAC ATTGGAGGCT GGCAACCCCT TCCCTTTTAT
ATCTGTGACA GTGACATCTA CGACCTGGCC CCGTCCGTTT TGCTCGGCAC CGTTGACAAG
CTGGCGCTCA TTGGCCAGTC CGCAAAAACC CTTCGCCGTA TTTACGGCAT GCTAGGTGCG
GCCCCCTGGC GTCACAAGGC AACGGGCCGG CTGAGGGTGC CGCAGCAACC CAAGGAATTC
GCAGGAGGCC CCGCAGCCCA CGGATGCGAG GGCCTGTTTC CCGCCTATCC CGATGGCATC
AAGCTGTTTC ACGACCCCTT TCCCAGCCTG CTGATTCAGG ACGAGGCGCA CTTGCTGGAC
GAGTCGCTGG GCACCTTCGC GGGCCTGTTT GAGTCGGCGC TGGACGCTAT TTTGGCCGAG
ATGAGCAAGC CGCTGCACGC GCTGGTGACG TTCGAGCCAG ACGGGCAGAC ACGCCGGCGG
GCCAAGGTCA TTGCAGCTTC TGCGACGGTC TCCGAGCCCC AGCGCCAGAT GGAGCACCTA
TACCAGCGCC CCGTGCCTGC GATGCAGTTC CCGTTTCCGG GGCAAAGTCT GTACGAATCG
TTCTATGCCG GGCCGAAGGC GCCATCGCCT CAAGACACGG GGCGGGCTGC TTTTGCCACC
CGTGACATTG AAAAATGGGC AAGCTGGAGC CGTGTGTATG TGGCGTTCAT GACCAACGGG
CGGCCTCATA CCGCGACCAC GGTGTCGGTG CTGTCTAACT TTCACACGCT TATTTCTGAG
TTCTTGATGG GGATGGCGTC CGGGGACACG CCGCGAATTG AGGCCTTGCG CGCTCGGCTG
ACAGCAGGTG TTTCAGAAGG CCCCCTCTGC GCGATGTACG TCGCCCAGCT TGAAGCGGCC
ACAGACTCCG AATTGGCTAC GCTCATCGAT TTGCACCGCA TCGCGCTGAC CTACGTCACC
AACAAAAAGG GCGGTGACCA AATCATGGCG GCTGAGTTTG AGGAGACGCG AAAGCGGCAT
GCCGACCGGG GCCTTGCCAT GGGCGACTTG AAAACCAAGT TGATTTCGGG CTCGGTGTCC
CAAGGGGACA TCCAGCACAC TATCGAAGAC GCGCAACGCC GGCCCGCGCC AGGGCACCCC
ATGGGCGAGC TGGGCGACGT GCTGCGCTCG GTCATTGCCA CCTCCTCCAT CTCCCACGGC
GTGGACGTCG ATGAGTTCAA CGCCATGTTC TTTGCGGGCA TGCCTTCGGA CATCGCCGAA
TACATCCAGG CGTCTTCTCG GGTCGGACGC ACGCATGTGG GCTTCATTGT GCTCATTCCC
ACCCCGCAGC GCCGGCGGGA CCGCTACATC GTGGAAGTGT TCGACAGCTT TCATCGATTC
CTGGAGCGCA TGGTTCAGCC GGCGGCCATC GACCGCTGGG CCGGCAAGGC CATCGAACGC
GTACTTCCCA GTTTCATCCA GACGTATCTC ACCGGCGTGC GGTACATGTC AGATATCACC
TGGGCGGAGC CTGAGGACAA GGAAAACGTC GCGAGCCTGG ACTGGATTCC CAGCATCATC
CGGGAACTCA AGCAGGAGGC GTCAAAGAAA AAGCTTGTCG ACGGCCTGTG CCGGTTTATT
GAGCGAGCCA TTGGCCTGAA TAACGGAGAT TTTGCACCGG GGGGCAAGGA GCACTACAGC
GCACTGGTGC GGGACAAAGT TTATGACTTG CTAAACGGCT GGGCCAGCAA CGACCTGCAG
GCAGAGCAGA GCCTGTTCGA GTACTTCCGG GAGCAAACCA GCGTGATGAA CCGGCCCATG
ACCTCCCTGC GCGACGTCGA TGAGATGGCC AATATCCATT TCGGCGGAAA GGACCTCAAC
GGCAGGAGGC TGGAGACCGA GCTCGCTCGC AAAGTGATGA TATTTATCCG GCATGGGGTT
GCGCAAAGTG ACGTAAGGGG AGAAGGACAA TGA
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| Protein sequence | MPDLLMRADP LTISTALKEA VVDALVNLTF QRISGHGPEG SILFGARPRA LLSSAFLLPV
PAGAAGGDEV TQPIQICAHG LDFQVSTSRQ GPVVVQPRLQ VYVRVLPSVE DMARPDCVLR
FRLNDVTRRD LQAKVSAALK AKWAEMMGTY KRRVDHPGWK TAEDEIRTRI HADLGLPRDL
KTLFSEEPED ASDEEGASAN VAEDGAAEEG FTVPGASAPE LTLKDSQFQP MDIPHKWLRL
PLPQDALPTF ILDPQQDKSG LREACELAAS ALNGAIGTAL LAWATSPEGL AWGFRTGIKV
YPSEYKGWAA FLEKVRASGK PVALPAIKLG WDARVSPDWL DPARASVHVS LENRSEPPKK
NRDETDDAVF QVDVTATLPR ALHRPLKLGR VEASYRYNKY LDYPATGFNG GVEVLHSENP
QVLTLRTTWS PRYTQPRIVP KSYTAVNPHI RALSEPQGLA GLLLLGEELD AWLATLPSKV
HLQEGLSADD VPGLLREQGG FAADTESWKK EIQAIHAGLR ILKESKAEWD KTKKRGPQSS
DKAAVYEAWL AMNETMAELM KEKLPDDSGA WRLFQIAFIV ANVPAIASRM KCFGHEFDRE
RDDTVTLLYF ATGGGKSEAF FGLLVLNLFF DRLRGKKTGV TAMLRYPLRL LTIQQAQRCA
RVLAKAELVR RKHGHGGDAF ALGFWVGSGG SPNHPGAPGM DLIPPVEKEP PTAKGEAALL
QTDVNYELQK AAWNKIPNCP FCKADTALRL FPALGGTLAH VCTSASCASN IGGWQPLPFY
ICDSDIYDLA PSVLLGTVDK LALIGQSAKT LRRIYGMLGA APWRHKATGR LRVPQQPKEF
AGGPAAHGCE GLFPAYPDGI KLFHDPFPSL LIQDEAHLLD ESLGTFAGLF ESALDAILAE
MSKPLHALVT FEPDGQTRRR AKVIAASATV SEPQRQMEHL YQRPVPAMQF PFPGQSLYES
FYAGPKAPSP QDTGRAAFAT RDIEKWASWS RVYVAFMTNG RPHTATTVSV LSNFHTLISE
FLMGMASGDT PRIEALRARL TAGVSEGPLC AMYVAQLEAA TDSELATLID LHRIALTYVT
NKKGGDQIMA AEFEETRKRH ADRGLAMGDL KTKLISGSVS QGDIQHTIED AQRRPAPGHP
MGELGDVLRS VIATSSISHG VDVDEFNAMF FAGMPSDIAE YIQASSRVGR THVGFIVLIP
TPQRRRDRYI VEVFDSFHRF LERMVQPAAI DRWAGKAIER VLPSFIQTYL TGVRYMSDIT
WAEPEDKENV ASLDWIPSII RELKQEASKK KLVDGLCRFI ERAIGLNNGD FAPGGKEHYS
ALVRDKVYDL LNGWASNDLQ AEQSLFEYFR EQTSVMNRPM TSLRDVDEMA NIHFGGKDLN
GRRLETELAR KVMIFIRHGV AQSDVRGEGQ
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