Gene Pnap_4911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4911 
Symbol 
ID4685757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp91204 
End bp94035 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content62% 
IMG OID639826553 
Producthypothetical protein 
Protein accessionYP_973717 
Protein GI121583281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.453849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATATC CCCTCAATCG TATGCAGAAC CAGGTTGCTC TTGAAAAAGA AAGACTGATG 
CAAACGCAGG CCGTCCTCCT GAAAAAGAAG GAGAACATCG CCAGGCTCTT GCGCATTGGC
GCCAAGCCGT CCTCGGGAGC TCCGGGGGAG CTGCCGGCCA AGGCCCGCGC CGAGAAGCCA
AGCCCCGGGC TGTCGGCAGT CCTGCCGCAG GAGTCCCCCG GCGAGCCCGC ACGCGTGGGG
GTTGGCTTTG ACCTTTACCG GGACATCGAC AATGCCCCAA TAACGGTGAG CAAGACCGTT
GAGCAGCTGG CCGGCCATCT CCTGCAAATT CCCGCCGACA AGGTGGAGGT CGCCCTGCTC
TGGCCCGGTA CGCTGCGCAG CCTGGCGTGC CTTCACGCTG TCTCCACCAT TTCAAGGTGG
CACAAGGGAG ACAAACGGGG AATCCGCACG CTGATATATC CCGCCAGAGC CAACGTGTTT
CAGGACCTGA ACCACGCCCA AATCGACCGC CTCGCGCTGG CCAAGCTGTA CGCCGAGCTC
TACGAGCCCC CGCGCGAGGT GAATCCCAAA GTTTTGGTGC CGTGCCGTGA AAAAGACACC
TTTTTTACCT CCCTCAGAAG CGTTCGTTGC GGCGCAGGCA TAGCACTGCA GCCCACTATC
GGGGAGATAC TGCCGCACTA TTATTCCGAC CAGGAATTCA AGGGATGGGC CTCCTGCGCG
GGCGACTTGC TCAAAAACTT GAAAACCCGG CTGGGAGACC TGCACCATAC CCGGGCGCTC
AACATGGACG CCATCCCGGC CCTCTCCGCC CCGGATTACG CACCTGATGC CCTGTTCGCC
CTGGGCTGGC GCAGCGGCGC CGAGGACCTT GAAAAAGCAC TGCGAAGCCT TAAAAAGCTG
GGCTCGCCCC ATGCCATCTT GGTCGATGTC ACCCGGGCTG CGCGCAAGAA CAATCCGAAG
TGGTTGCGCT CAACGGTGAG GTTTCTCCAA GTGGTTGCTG ACGTGTGGCC CAAGCAGCGG
CCCGGCATCT GCATCGTTGC CGACGAGCCG CACTTGCGCA ATCAGCTAGT CCAGGAAATG
GCTCGACTCG GCGCAAAAAA CGGCGGCGCG ACCCTGCCGG CTGGCAGCAC CGGGATGGCG
CTGCATGGGT TTCCCTGCGC CACTACAAAG GACGGGTTTC TCCCCGCCGG CGCAGCTGAG
GCGCTGACGC CCCAGGCCCG GGACATACAG GTGGCCTTTA CCGACACAGA GGCTGCCAAG
CTCATTGGCC AGGTGGACAG GCTGAAAAAG GCAACTTCGA ACCCGGGCAG CCAGGAGTTG
CTGGGCAAGG TGTCGCGTTA CCTGTCCCAG CTCTCTGCGC TTCCCTCCAG CACGCGGGTG
CTCTCGGAGT GGCTCAATCA AACCGGCATG CCCATGGCAG TGCGGGAGCA GTACGCCTGG
CCCAGCTATC GGTCCAAGTT GCGCGTGCTC CTCCAGGACC CGGGGTATGC GGACAAGACG
CGGCTTGAAG GCGTGATTAA AAAGTGCGAC GCGATGTGGC TCGCGTATGA AAAGGGCACT
CCGTTTGCCC GGCAATTGGC CAATCTCCTG GACAAGCACA CAGGCGGCAC GGAGCGCTGT
TGCGTGGTGT TTACCCGGCC CACGGCCAAG CGTCTGGCCG AGCGCTATTT CGAAACGTAC
GACGGTTATC CGCAAGGCGC AGGTTTTGAG GTTTTGAAGG ACCGCGTGCG CATGGTGGTG
TCTGGCTCGC CTTCAGCAGA GCTGGGACTG CGCGAGAACG AGACTGTCGT TTTCGCCGGG
CTTGATGAGA ATTCGCTGCG CAGCCTGATG CTGGAGGACG GGATTTCGGC GCGTACGCAC
TTGCTGCTCA CCACGAGGAA CGCGGCTTAC CTCAAAGCCA CGCTGGCGGT CATCGACGCG
ATGCCCGCCT TCAAGGACCT GGGCCCACGC GTCACGGGCC TGCTCAAGCA GCTGCCGGAG
TTTCCCGAGC CAAGTGACCG CCAATTCCTT GCCCGCGAAG ACTTTGTGCT TCCCGCCTTT
TCCTTTGAGC AGGCACTGGC CACGCAAAGC CAGGACGAGG AGAGCAAGGA CCCAGACGCG
TGGGAGCTGG TCCTGGAAAA CGGGCGGTCC GTGCGGCGCA GCCCGGGCGC GAAGGTCTAT
ATTTTCGACC CCCTCTACGG ATACACGCAA ACCCGGGGAT TTCGAGGCGT GGGCGTGCAG
GACCTGCAGG CCGGTCAGCG CCTTTTCGTC ATGTCCGGTG AACTGCGCGA AGCGACCGAG
GCAGCTCTGC GGGATGCGGG GGTGGACGTT AGCCACGACA AGCAGTTTGA AGCGTCCCTG
CATCACTACC ATAACCGGGT GCTTCGCGGT ATTGCTGAGA CCTTGAAAAA GGCAACGCTC
CTCGAACAGG CGCGTGAGCT GCGCGAGCGG CTCATCGCTG CGCCAGACGC ACCCCAAGGG
TTTCCCGCCG AGGGTTCCAT CCGGCACTGG CTGGACGTAG CGGGCCATAT GAGCGCAAAT
TTTCAGGAGC AGACCAGCCA GGCGCCCCGG CAGGCCGCGC ACTTCAGTGC CTTCGCAAAG
GTCATCGGGT TTAGTGCCTT GGAAACTGTC TATTTCTGGA AAGCTGTCAT CCAGCCCCTT
CGGGGCGCAA GGCGGGCAGA CGGGCGCCGC GTCTCAGACG CCTACTCCGA CATGCTGATG
GAGCCCGAGT CGGTCGTCGT CCATAAAAAA ATGAAGCCCG AAGTCGTTTC GTACCTTTTC
TCTCGTGCCG AGGAAAACGT GTATTCCATC GAAGCCATCA AAAAACCTCA CTCAAGGGAA
CTAAATGCCT GA
 
Protein sequence
MSYPLNRMQN QVALEKERLM QTQAVLLKKK ENIARLLRIG AKPSSGAPGE LPAKARAEKP 
SPGLSAVLPQ ESPGEPARVG VGFDLYRDID NAPITVSKTV EQLAGHLLQI PADKVEVALL
WPGTLRSLAC LHAVSTISRW HKGDKRGIRT LIYPARANVF QDLNHAQIDR LALAKLYAEL
YEPPREVNPK VLVPCREKDT FFTSLRSVRC GAGIALQPTI GEILPHYYSD QEFKGWASCA
GDLLKNLKTR LGDLHHTRAL NMDAIPALSA PDYAPDALFA LGWRSGAEDL EKALRSLKKL
GSPHAILVDV TRAARKNNPK WLRSTVRFLQ VVADVWPKQR PGICIVADEP HLRNQLVQEM
ARLGAKNGGA TLPAGSTGMA LHGFPCATTK DGFLPAGAAE ALTPQARDIQ VAFTDTEAAK
LIGQVDRLKK ATSNPGSQEL LGKVSRYLSQ LSALPSSTRV LSEWLNQTGM PMAVREQYAW
PSYRSKLRVL LQDPGYADKT RLEGVIKKCD AMWLAYEKGT PFARQLANLL DKHTGGTERC
CVVFTRPTAK RLAERYFETY DGYPQGAGFE VLKDRVRMVV SGSPSAELGL RENETVVFAG
LDENSLRSLM LEDGISARTH LLLTTRNAAY LKATLAVIDA MPAFKDLGPR VTGLLKQLPE
FPEPSDRQFL AREDFVLPAF SFEQALATQS QDEESKDPDA WELVLENGRS VRRSPGAKVY
IFDPLYGYTQ TRGFRGVGVQ DLQAGQRLFV MSGELREATE AALRDAGVDV SHDKQFEASL
HHYHNRVLRG IAETLKKATL LEQARELRER LIAAPDAPQG FPAEGSIRHW LDVAGHMSAN
FQEQTSQAPR QAAHFSAFAK VIGFSALETV YFWKAVIQPL RGARRADGRR VSDAYSDMLM
EPESVVVHKK MKPEVVSYLF SRAEENVYSI EAIKKPHSRE LNA