Gene Pnap_4910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4910 
Symbol 
ID4685714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp89447 
End bp91201 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content56% 
IMG OID639826552 
ProductN-6 DNA methylase 
Protein accessionYP_973716 
Protein GI121583280 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.268375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.686666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATTC CAGAGTCAAA AATACGTTTT AACTCGTTAG TTAAATCACT CGATACGATA 
GCTAAGGATA GTGAAAATGG ACCTCAAAGA CTTGTAGAAG CTGTTCTTCA TGCTTGGCAA
CTACAGTCCT ACCCTTTGCT CGCAAAGCGT GTCTCCCGCC AGCTTGGTGA ATTACCGCTC
AAGGATGACG TCAATAAATT TTCCCTGTGG CTTTCGCAGC AAAGCTTTAA CGATGCTGCG
TTTTGGCTGG CTTCTGCGTA TGCCACATGG GTGGGAGAAA AACGCCGCAC GGAGCAAGCC
CTCTATTTCA CGCCTCCTAA GCTTGCGGAC CGGGTCATCG ATGACCTGGT TCAGCGAGGC
GCGTCCCTGA CCACGGTCCA CTGGCATGAC CCCGCCTGCG GAGGAGCGGC ATTTCTGGTC
CCCACGGCGC AGCGCATGGC CCAGGCGCTG GCGGGCCTCG GGCTTGCCTC GGGGGAGGTC
TTGAAAAGGA TTGAACGCCA GCTCAGCGGC AATGACCTGG ACAAGGCACT CTTGTCGCTA
TCCCGTCAAT TTCTGCTGAT GGCGCTGTAC CCGCACATCA AGGCTGCACA GCGGTTTCCC
GACTTTGACC TGCGCAACGA GGACGGGCTG TTACCTCCCC CCTCGAAGTA CCAAGCCCCG
GACGTTGTCA TCTGCAATCC GCCCTACCGA AAGCTCAACG CAGCTGAAAC CCAGCGCTAC
GCCTCGAAGT TTAAAGATGT CATCCGCAGC CAACCCAATA TCTACGGGCT GTTTATTCGC
GAGGCGCTCA ACGTGGTCAA GCCCGGGGGC TTGATTGGCT TGCTCACGCC GACCAGTTTT
TTATCGGGAG CGTCTTTTTC CAAGCTGCGC TCACGCATTG TGGATTTATC GCATATTTTG
CAGATTGACA TGCTGAGCGA CCGCACCTCC ATGTTCATTG CGGTGGAGCA AGAAACGGTC
ATTTCCGTTT TGAGAGCGCT GCCGACCCTC ACGCACGAGG CTATGCCGAC GGATATTCAT
ATCCTGACTC CAGGCGGCAC CTACGAAAAC GTTGGCAAGC ATCGCCTCTG CAATAACGGC
GCACCCTGGG CCATCCCCCG GTCTACCGCG GACTCCGCGT TGCTCGACTG CGCCGAGCGG
TCAACCGCCC GCTTGGGTGA CTTTGGCTAT AGCGCAAGAA TTGGCCACCT AGTTGCCTTT
CGGGACAAAC GACGACGGTT TCCGCAAAAG CCAATGGACG ATGCACCCCG CTGTGTCGTT
CCAATTCTTT GGGCTGGCGA TATCACCAAG GAGGGGCTGG ACCACGGCCG TGTTCAGAAG
AAAAACCGCA CGGATTATTT CATCGAAGTC TCCAGCCTAG GCCACACGAG TGTCATCAGC
TTGCCTTCGG TTGTTCTGCA GCGGCTGACC TCGAACGACC AGCACCACCG GTTAATTGCG
GCCCCGGTGC CCCGGTGCTG GCAAACCGCA CACGGAGGAT TCGTGGCAGA AAACCATGTG
GTCGTTTTGC AGACACAGCC GGGCAACCGG TGGACTCCGG CGCTCATGGC CAAGGTGCTC
AACTCTGCGG GAATCAATCG CTTGTATCGC TCGATTTCAG GCGCCTCAAA TGTTGCCACG
TCGGAGCTGC TGGCGCTACC CCTGCCACCG CCCCGCGAAC TGGATGAGGC TTTGTCCAGA
ACCGAAGACA TTGATGAAGC CATACGGATT GCTTTCGGAT TGGCCACCCC CGTGACCTTA
AGGAAAAAAG CTTAA
 
Protein sequence
MVIPESKIRF NSLVKSLDTI AKDSENGPQR LVEAVLHAWQ LQSYPLLAKR VSRQLGELPL 
KDDVNKFSLW LSQQSFNDAA FWLASAYATW VGEKRRTEQA LYFTPPKLAD RVIDDLVQRG
ASLTTVHWHD PACGGAAFLV PTAQRMAQAL AGLGLASGEV LKRIERQLSG NDLDKALLSL
SRQFLLMALY PHIKAAQRFP DFDLRNEDGL LPPPSKYQAP DVVICNPPYR KLNAAETQRY
ASKFKDVIRS QPNIYGLFIR EALNVVKPGG LIGLLTPTSF LSGASFSKLR SRIVDLSHIL
QIDMLSDRTS MFIAVEQETV ISVLRALPTL THEAMPTDIH ILTPGGTYEN VGKHRLCNNG
APWAIPRSTA DSALLDCAER STARLGDFGY SARIGHLVAF RDKRRRFPQK PMDDAPRCVV
PILWAGDITK EGLDHGRVQK KNRTDYFIEV SSLGHTSVIS LPSVVLQRLT SNDQHHRLIA
APVPRCWQTA HGGFVAENHV VVLQTQPGNR WTPALMAKVL NSAGINRLYR SISGASNVAT
SELLALPLPP PRELDEALSR TEDIDEAIRI AFGLATPVTL RKKA