Gene Pnap_4897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4897 
Symbol 
ID4685682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp72067 
End bp73236 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content53% 
IMG OID639826539 
Producthypothetical protein 
Protein accessionYP_973703 
Protein GI121583267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.285183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.157342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC TGAGTGACAC GCTTGCGACC GGTTGGCGAA GGCTGGTTGA CGCAATCAAC 
TGGGTTTTTG CCACAGCCTG GATGGGCGCC ATCATCCCTT TTTTTTCAAT TGGCGTGGGT
TTCGCGTGGA GTTCCTGGAA GGAACAAATA GCCGACTCGT TTCTGGTCAT GGCAAGGCCG
GGCGATGCGA ACTTCGATGT GAAGTCAACC TTTTTTTGGC TCTTATGCCT GTTGCTGCTG
CTTCTGGGCA TCGGCAACAC GTGGGCCAAA AATCGAGATA GCGCCCGCTC GGCAGCCGAA
GTCAAAGCCC TGTTAGCCAG GCTTCAGGAG CAGTCCCAAC AGCATACGGC TGCAGTCAGC
CAGTTGCACT CCTTGCCGCC CTTGGGCGTA CTGGAGGACT TCCACCAAGC CTATAACCTC
TGCGACAACA TCTCTATCAA ATCACTGCAG TTAAACACGG CGGTATCGAC GGCCCTCAGC
GACCATGAGG CGGCGTTGAG GACGTTCATG TCGGTGGTTG GACGTGTGAT TCAAACGTTT
GATGGAGAGC ATTTTCTCAG TTCCAATGTT CGTTATGGAC TGAACATCAT GCTGTTCGTC
ACCAAACAAG AATATGAAGC CAGACCGTTA AAGGCTGCCT TGGCTACTCG GCTTCGGTTT
GCCGACAAGG GACTCTCCCT GGACAATGCG GCCGGCGTGC TGGACATGCT GCCAGCCGTG
TCAATCGCTG ATGGCATGGA AATGCCTGAT AGCGAATTGG AACACTTTGC CATTCCAATC
GCTGATGTTC CAGTCTATGC ATCCAAGGCA TCAAAAGAAC GGCCGGCATT GCCCGGCGCC
ACGCATTGCT GCGTCAACAT CATCCATGTG GCTTATGAGA GCATTGATGC GTTTCGTAAG
GCGCTTGAAG ACCTTCAAGC CGATGACGGC GTCAAGGCAG AAATGCTGAG CTACTTCGAA
AAACCCAATA TTCGCAGCAG TGTGCAGAGT TTTCTATGCG TTCCGCTTAT TGCAAGCGAC
ACCGGGCTGG TCGGCGTGCT CAATATTCAT CGTGATACAG CCAATCCGAG AATCAAGGAC
CGGATGGCGC TTTTGGTGCC TTTGCTGGCA CCCATGCGAC AGCAACTTGC CCGATTGCTC
TTGAAGTACA AATCGCTATA CTTATCTTAA
 
Protein sequence
MTKLSDTLAT GWRRLVDAIN WVFATAWMGA IIPFFSIGVG FAWSSWKEQI ADSFLVMARP 
GDANFDVKST FFWLLCLLLL LLGIGNTWAK NRDSARSAAE VKALLARLQE QSQQHTAAVS
QLHSLPPLGV LEDFHQAYNL CDNISIKSLQ LNTAVSTALS DHEAALRTFM SVVGRVIQTF
DGEHFLSSNV RYGLNIMLFV TKQEYEARPL KAALATRLRF ADKGLSLDNA AGVLDMLPAV
SIADGMEMPD SELEHFAIPI ADVPVYASKA SKERPALPGA THCCVNIIHV AYESIDAFRK
ALEDLQADDG VKAEMLSYFE KPNIRSSVQS FLCVPLIASD TGLVGVLNIH RDTANPRIKD
RMALLVPLLA PMRQQLARLL LKYKSLYLS