| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4895 |
|---|
| Symbol | |
|---|
| ID | 4685743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008759 |
|---|
| Strand | + |
|---|
| Start bp | 67137 |
|---|
| End bp | 68468 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639826537 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973701 |
|---|
| Protein GI | 121583265 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.275823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGC ATTGGGCAGC GCTGCTGCTG CACCTGCCCC CCGGCACGTC GTCAGCCATT
GATGCTGGCT CCCTGGCCGT CTGGGCGCTG CAATTCACGC CTCGCGTGGC GCGCCTGGAA
GAAGCCGTGG TCCTCGAAGC CGCGCAGAGC ATTCGCTTGT TTGGCGGCGA GTTGCCTTTA
CACGAGCAGG TCGAGCAAGG CGCCAGGGCG CTGGGGGTTG CCTTTACCGC CTGGGCGCCG
ACCAGCCTGG CGGCGCTGGC GCTGGCCCGC GCCGGCGTGG CTGACGGCTT TGCCAGGCCG
CTGACCCAGC TGCTCGACCC GCTGCCTTTT GCGGTTTTAA GCGCAGTCAA TGTCCATGCC
GCCACGCTGG CGCGCCTGGG CTGCCGCACG CTGGCCGATG TGCGCCGGCT GCCCCGGGGC
GGCATTGGCC GGCGCTTTGA CGCCGCGCTG CTGGCGGCGC TCGACCAGGC ATATGGCCTG
CGCCCAGAGG TGTACGACTG GGTCGCGTTG CCGGTGACCT TTGCCGCCCG GCTGGAGTTG
CCCGGCCGCG TCGAGACCAC TGCCGGCCTG CTGTTTGGCG CCAGGCGGCT GCTGCTGCAG
CTGGGCGGAT GGCTTGCCGC CCGGCATGCG GGGGTTACGG CATTTACTTT CCGCTGGCGC
CACGACACCC TGCGCGCGCA GTCGGCCGGC GAGGGCTGCG AGCTGCTTAT CCGCACGGCC
GAACCAACCC AGAGCGTTGA GCGCCTGGGC CGACTGCTGG CCGAGCACTT GGCGCATGTG
CAGCTGCTCG CGCCGGCCCT GGAGCTTGAA CTGCTGGCCA CCGGGGTCTC GCCGATGGCC
GAGAATAACC ACTCCCTCTT GTTTGATGCG GCCCGGCAAG GCGAATCGCT GGGCCAGGCA
CTCGAGCGCG TTGAGGCGCG CCTGGGCAAA AGGCGGGTGC TGCGCCCTCG CCTGGTGGCC
GACCACCGGC TTGAATGGAT GCAGCGCTGG CAGTCGCTCG ATACCCCTGT GCTGGGCGCA
GGCCTGTCCC CGGCCCAGGC GCCGCAGCCG ACTTGGATGC TGCGCACGCC CTTGCGGCTG
GCCACGAGCC AAGACCGGCC GCTCTACCAG GGGCCCTTGC TGCTGCTGCT GGGCCCGGAG
CGCATCGAGG GCGGCTGGTG GCACCGCGCC GAGGGCAAGA ATGGCCAGGA AAGCGAGGAG
GTCGCGAAGG ACTTCAATGT CCAGCGCGAC TACTGGGTCG CGCTCAGCGC CCATGCGGGC
GTGCTGTGGA TTTTCCAGCA GCGCCTGGGC AGGGAACAGA CGGCGTGGTA CCTGCACGGG
CATTTCTCGT AA
|
|---|
| Protein sequence | MSMHWAALLL HLPPGTSSAI DAGSLAVWAL QFTPRVARLE EAVVLEAAQS IRLFGGELPL
HEQVEQGARA LGVAFTAWAP TSLAALALAR AGVADGFARP LTQLLDPLPF AVLSAVNVHA
ATLARLGCRT LADVRRLPRG GIGRRFDAAL LAALDQAYGL RPEVYDWVAL PVTFAARLEL
PGRVETTAGL LFGARRLLLQ LGGWLAARHA GVTAFTFRWR HDTLRAQSAG EGCELLIRTA
EPTQSVERLG RLLAEHLAHV QLLAPALELE LLATGVSPMA ENNHSLLFDA ARQGESLGQA
LERVEARLGK RRVLRPRLVA DHRLEWMQRW QSLDTPVLGA GLSPAQAPQP TWMLRTPLRL
ATSQDRPLYQ GPLLLLLGPE RIEGGWWHRA EGKNGQESEE VAKDFNVQRD YWVALSAHAG
VLWIFQQRLG REQTAWYLHG HFS
|
|---|
| |