Gene Pnap_4891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4891 
Symbol 
ID4685753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp62792 
End bp64600 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content51% 
IMG OID639826533 
Producthypothetical protein 
Protein accessionYP_973697 
Protein GI121583261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.981822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG TCCTAACGCG ACTGGCCGCT ACTGGGTCAA ATCTACCGAC TGCAGAGATT 
ATTTTCGCGC CGAATCGAAA TCTTATTCGC GGGCCTAGCG ATACTGGCAA GTCATATCTG
CGAGACTGTC TTTGGTACAT GCTCGGTGGC GATAAGCTGC CTAAGACATT TCCAGAATCT
GAAGGTTATC AGTCGCTGTC GCTGACTTTC TTGAGCGGAA ACTGTGAGTT CGTAGTGCAC
CGGGGCTTGG CTGGCGGTGC AGATGCAGTC TTCGTCAGAG AGATTAATAC AGTAGCCAAT
GTCGCGGCGG AGAGGTTAGA TGTCAATACG GGTGAGTTAT TGGTTCAGCT ATCGGGGGCA
AAGGGAAAAA AGGTACTCCG CTCGACCAGT GAGAAGGGTG ACATAACTGG TGACGACCTC
CGTCACTGGT TCTTGCTGTC CCAGCCTACA GTTATCAGTG AGGACGGCAC GAGCGGCACT
GGCTTCTCGG CCACAAAGCA TATAAGCTCT TTCAATCTTT TTCTTACAGG CGACGATGAC
GCTGGTATCG AACTTCGGAA GACGACAGCA GAGGTTGAAC GCATTAAGGG GCAACTTAGC
TCTGCCGAGG ACGGACTCAA ACGAATTCAG GTGGGACTTC CCGGTAACGC AGTTCGGGAT
GATGTGGCTG AGGCACTCGA ACATGTAGAT ACGGCACTAT CCGCTATGTC AAGCCATTAT
GAAGCGCGTG CTTCACAGTT GAAAGAATTA CGTTCGCAAA TCACCACCGC ATCAGAAAAT
CTATTCCAGA CTACGTCTGC GTATGGTCAT TCCGCGTCGA TGGTTGAACG GTTTCAGTTA
CTCGACAAGA AGTACTTGAG TGACCTTCAG AGGCTGGGTG CAAGTAGTGA AGGCATCGCT
TTCTTCCAAG CGCTCCCCGA AACTCCTTGT CCATTGTGTG GGACACCCAT TGAGCAACAA
GTTGACCTAA AGGAACTGAA TCCGGGCCGC CCTCAGCGCT ATCGCGAGGC CATCGCGGCT
GAGGCCGAGA AGATTAGGAT ACTGAGGTGC GGGCTTCTGG TGTCACTTGA GAACGAACGA
GGACGCGTAG CTGCTTTAAA ACTGTCGGAA GCAAGCTACA GCCAGGAACT TGCCACCCTG
CAGAATCACG AGATACAGCA ATTGACCGCA ATTCGCTTGG AATTTTCAGG AGACCCGAAG
ACGCTCGCGG TTCGTCGAAG TGAACTTTCA GCGCAGTTGG CCATTTTCGA TGAGATGGAG
CGACTGAACG CTGAAGTCGA CCGCTTAGGA AAGTTAAAGA TTCGACCACA TATCCGCGTG
AACCGCGAAA CGGGAGCCGC AGCCCTTGCT GTCGGAAAAC TTGCCAAAGC GTTGTTAACG
GAATGGGGTT TTACATCAGT TGAAACCGTC GTCCTGGACC CGGCCGCTTG TGATTTAGTC
ATTGACGGAA GAGCACGTTT AAGCTATGGC GCGGGCAAAC GAGCCATATT TTTGACGGCA
ATGACTGTTG CTATGCTTCA TAACAGCCTT GAAAGTAATT ATCCACATCT CGGAGTAGTG
GTCATCGATT CACCTTTGAA AGCTTATGCC GACCCTACGC TCACTGACTC GAATGATGTC
GCGCTATCAA CGGTTACGGA TAACTTCTAT GACTGGCTTG CAAAGTGGGA GGGGCCGGGG
CAAGTCGTAA TTCTAGAGAA TGAGGAGATT CGCGCCGAGA CGGCGAAGGT GCTCAAACCT
ATTGAGTTCA CAGGCACAAG AGGTAGCGGG CGCACAGGCT TTTATCCGGA GGGAATTGAG
GGTACTTGA
 
Protein sequence
MAIVLTRLAA TGSNLPTAEI IFAPNRNLIR GPSDTGKSYL RDCLWYMLGG DKLPKTFPES 
EGYQSLSLTF LSGNCEFVVH RGLAGGADAV FVREINTVAN VAAERLDVNT GELLVQLSGA
KGKKVLRSTS EKGDITGDDL RHWFLLSQPT VISEDGTSGT GFSATKHISS FNLFLTGDDD
AGIELRKTTA EVERIKGQLS SAEDGLKRIQ VGLPGNAVRD DVAEALEHVD TALSAMSSHY
EARASQLKEL RSQITTASEN LFQTTSAYGH SASMVERFQL LDKKYLSDLQ RLGASSEGIA
FFQALPETPC PLCGTPIEQQ VDLKELNPGR PQRYREAIAA EAEKIRILRC GLLVSLENER
GRVAALKLSE ASYSQELATL QNHEIQQLTA IRLEFSGDPK TLAVRRSELS AQLAIFDEME
RLNAEVDRLG KLKIRPHIRV NRETGAAALA VGKLAKALLT EWGFTSVETV VLDPAACDLV
IDGRARLSYG AGKRAIFLTA MTVAMLHNSL ESNYPHLGVV VIDSPLKAYA DPTLTDSNDV
ALSTVTDNFY DWLAKWEGPG QVVILENEEI RAETAKVLKP IEFTGTRGSG RTGFYPEGIE
GT