Gene Pnap_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4888 
Symbol 
ID4685687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp61259 
End bp61846 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content54% 
IMG OID639826530 
Producthypothetical protein 
Protein accessionYP_973694 
Protein GI121583258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.399486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGA CCACCTTCTG CCCAACTTCC GTCTCCGCTC CTCAACTTTC TAGCGTGCTT 
CGCAAGCGCG GCAAAACGCC GACGACCGTT GACTTCCTCA AGCTGGCCAA GGCTGCGGCC
TGGTTCGATA CCGACGAGGA AGCCTGCGAA ACGCTTCAAA ACGCTGGGTT TACTTGTACG
CCGCGGGTTG TTGAGAAGCT GCTGAGCGCT TCAAAATTTA TTTGGATGAC ATGTGCAAAC
CAAGCGCACG ACATCTTTTT GAAGAGTTTA GGCGACGCTC CACAACTAAC CTGCCGACTT
CCGCGCCTGC GCAATCGTAC GGGCCGTTGC TACGAATTGG CATATCGTGG CTGCTGTCAA
GGGAACAAAT GGACGGTGAT ACATGGCGAG ACCATCGGGC CGCATGGCAT TGGGCGGATG
GGTCATGCGT GGCTTGAAAA CAATGGCTGG GTGTATGACC CGGTGTTAGA CCGAACCATG
CATTCTGATG TGTACGTCTT GCTTGTTGGC GTCCTTGTAT TCAAGCGGTT TACGGTTTGG
GAAATGCACA ATGAAGCTGC TAAATGCGGA CATTACGGGC CATGGTGA
 
Protein sequence
MPSTTFCPTS VSAPQLSSVL RKRGKTPTTV DFLKLAKAAA WFDTDEEACE TLQNAGFTCT 
PRVVEKLLSA SKFIWMTCAN QAHDIFLKSL GDAPQLTCRL PRLRNRTGRC YELAYRGCCQ
GNKWTVIHGE TIGPHGIGRM GHAWLENNGW VYDPVLDRTM HSDVYVLLVG VLVFKRFTVW
EMHNEAAKCG HYGPW