Gene Pnap_4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4876 
Symbol 
ID4685794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp51097 
End bp52152 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content51% 
IMG OID639826518 
Producthypothetical protein 
Protein accessionYP_973682 
Protein GI121583246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.649455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTGAGC ATTTCCAACA TTGTGCAGCA GAAGAGGAAT TTCAAATGGC AAAAGACTGG 
CGACTGGAAG ATATTAGCGA ACTGTGCGAC GAAGAAATTC GGACTCTCCG TACGAATGCC
GAATGTCGAG GAGGGGCCTG TGTTATCGCA CTTTGCAACA CTGTACTGGC GAGTCGCGGC
AACTCCAGGT CGACTCGCAA TCGGCGCCCG GTCGCGACTC AAAATGGGCA CCCTGAGATG
AACTCTAATG CCGTTGACCT GGTAGCCGAC TTATTTCGCG GCTTGCCGAT AGCAGCCAAC
ATGCCCAATG CCGTGCGTCG CCAGCAATTA CAGGCGCGAC CTATTGAAAC GCTCGGAGAG
CTTTGGAGGT TGTTTGTTGT TTGTGGTTTT TCATCTCAAG AAAATTCATC GGAAAACGGA
CCTCTCGCGA ACTTTTTTCG TAAAGATGGG CCATTGCTTT CGTTAGACAG GGTAATCAAG
GATGGCTCGA AATTAGAGTG GGTGCTTGCT CAATTAGTTG GGTTCGGGCT TCGCTTTACA
CCCAACAAAG CTCTACTCGT TACGGGCAAC CTTCCGTTTT TTGCTCAATC CGGTTCTTCG
AGCACTCGCC TGGACTCTCT TTCTCAGTCC GGTGGACCGC TATCTTTATT CGGACGCTTA
TCCCTCGATG GCTCGTTGCG GGACAGTGAT AGAGAAATTG CACGGTCTGC AACATTCAGC
GCCGCACTGC AGGACGTGCC CTTTCCGCAG ATTGGTCAGA AACAGCTGCG CAATATCCTC
GTGAACGGCG GCCTCAGCCG CAACGTTGTT CCGCTCGACT CCCGCTGGAT GAATTTCCTA
CGTCCAGCAT TTAAGGGTGG GAAAATAAAA GTCGAGCGGT CTCGATATTT GGTCTACGAA
CAGCTATTAA GAGATGCACT AATCAGCGTA ATCGAGCAGA GACCCGACCT AGAAAATTTG
GCTATCGTGG ATGCAGTAGT TTTTTCGATT AAAGACCAAT CAAGCACGGA CGCATTGAGG
CCGACAGCTT GGTTTGGCGC TGCCGAGGTG CTCTGA
 
Protein sequence
MVEHFQHCAA EEEFQMAKDW RLEDISELCD EEIRTLRTNA ECRGGACVIA LCNTVLASRG 
NSRSTRNRRP VATQNGHPEM NSNAVDLVAD LFRGLPIAAN MPNAVRRQQL QARPIETLGE
LWRLFVVCGF SSQENSSENG PLANFFRKDG PLLSLDRVIK DGSKLEWVLA QLVGFGLRFT
PNKALLVTGN LPFFAQSGSS STRLDSLSQS GGPLSLFGRL SLDGSLRDSD REIARSATFS
AALQDVPFPQ IGQKQLRNIL VNGGLSRNVV PLDSRWMNFL RPAFKGGKIK VERSRYLVYE
QLLRDALISV IEQRPDLENL AIVDAVVFSI KDQSSTDALR PTAWFGAAEV L