Gene Pnap_4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4874 
Symbol 
ID4685770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp49378 
End bp50232 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content57% 
IMG OID639826516 
Producthypothetical protein 
Protein accessionYP_973680 
Protein GI121583244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.771937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGAA AGAACAGCTG GATAATCATC CTGGCGTCGC TTCAGCTGCT TGTCAGCCTT 
GCGCTTGCCT GGGCGATTGT CTGGGGATAT GCAGTATCCC AAGCTCCATT GGGGCAATTT
TTCCATTCTG TCGCGGCCTC CATTGGGGCG GTGTCCAACG TGGTTGGCCG AACGGCAGAG
ACCGTCGAAG CCAGGCAAGG ACTCATCGAG CAGACAGGAA AGATGCTTGT TTCGACGCGA
GTCCTCCTTC AGGAACTTCG GGTTGCTGCA GAGAACCAGG TCAAGTTGGT TCCCCAGTAT
GCCGGGAACA TGCGCGCAGC ATCAGAGGTT TCTGGAAAAC TTGGCGGCAC CCTCCAATCC
GTCAGCGAGG GGTTGCTCTT TTCCGTTCCG ACCAGCATTG AGATGGATGG TATGAAACCC
GTCGTCAAAA TGTCGCGCCC CCTTGAGAAG TACGCGCAGG ATTTGAAAAC GCAGGCCCAG
GACATCAAGG CGGTCAGCCA GACCTTGCTC GATATATCGG TCACCATGGG CCGAGACGGA
AAAAACCTGA GCGCAGCGTT TGTTACCACC AACCAGGATG CGCTCAAAGT GGTCGACGAG
GTCGAGCGCA CACTCGGGCG GCTCAACACA CAGGACTTGC CCAAAGCGCT GGAGGATTTG
CGGGCAACCG CTGAAAACCT GCGTGCCATC AGTGAAAAGG TCGATATCGC TAGCGACATC
GGCAAAGTGC TTTTGGCCGT TGGCCTGCTG CTGGCCCTAT GGTGCGCGCT GAACAGCGTA
TCCACGCTGA TGCTGGCAAA CGCCCTGCCA GCAGACCCGA AGCGAAACAA GCTCAACTTA
AGTGGCAACC CCTGA
 
Protein sequence
MRGKNSWIII LASLQLLVSL ALAWAIVWGY AVSQAPLGQF FHSVAASIGA VSNVVGRTAE 
TVEARQGLIE QTGKMLVSTR VLLQELRVAA ENQVKLVPQY AGNMRAASEV SGKLGGTLQS
VSEGLLFSVP TSIEMDGMKP VVKMSRPLEK YAQDLKTQAQ DIKAVSQTLL DISVTMGRDG
KNLSAAFVTT NQDALKVVDE VERTLGRLNT QDLPKALEDL RATAENLRAI SEKVDIASDI
GKVLLAVGLL LALWCALNSV STLMLANALP ADPKRNKLNL SGNP