Gene Pnap_4860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4860 
Symbol 
ID4685738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp37426 
End bp38112 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID639826502 
Producthypothetical protein 
Protein accessionYP_973666 
Protein GI121583230 
COG category[S] Function unknown 
COG ID[COG3416] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.261005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCT TGATTTCAAA CCCGGAGCCC TTCATGAATT TGCAAGAACG CGAGCAATTG 
ACCACTTTCC TGCAGCAACT GGCCCAGGCG CGGGCGGGCG TCAAAGATGA AGAAGCGCAG
GCGATGATTG CCAGCACGTT TGCGCGCCAG CCCGATGCGG CCTATCTGGT CGTGCAGCGC
GCCTTGCTGC TTGACGCCGC CTTGCAGGAT GCCCAAGCGC AGATTACTCA GCTCAAGGCC
CAGCTGGCGC AGCAGCGCCC TGCCCCAGCG GCGTCAAGCT TTCTCGATGC GACCACCTGG
GGACGCCAGC CGAGTCCAGC CTTTTCGGCT CCCGTGATGA GCAGCCCGCC TGTTCAGGCG
GTTCAAGCTG TTCAGCCGGC AGCCTTTGCC CCGCCTGTCC GTGGATTTCA GGCGCCCGGT
TTTCTGTCCA ACATGGCCAC CACGGCTGCG GGCGTGGCCG CGGGCGCATT CCTGTTCCAG
GGAATCAACA GTCTGGTGGG CGGCCACCAC AACTCACCGC TTGCGGGAGC CAGTCCCTTG
AGTTCACCTG CTGCGGACAA GGAGGCGCCT GCCAACAACT TCCTTGACGC GCCGACTGAC
ACCAGCAGCA GCATCCCGGA CAGCAGCGCC GGGTTTAGCG AGTTGCTTGA TATCGGTGGG
TCTGACGACT CCAGCGACTG GACTTGA
 
Protein sequence
MLPLISNPEP FMNLQEREQL TTFLQQLAQA RAGVKDEEAQ AMIASTFARQ PDAAYLVVQR 
ALLLDAALQD AQAQITQLKA QLAQQRPAPA ASSFLDATTW GRQPSPAFSA PVMSSPPVQA
VQAVQPAAFA PPVRGFQAPG FLSNMATTAA GVAAGAFLFQ GINSLVGGHH NSPLAGASPL
SSPAADKEAP ANNFLDAPTD TSSSIPDSSA GFSELLDIGG SDDSSDWT