Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4860 |
Symbol | |
ID | 4685738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008759 |
Strand | - |
Start bp | 37426 |
End bp | 38112 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639826502 |
Product | hypothetical protein |
Protein accession | YP_973666 |
Protein GI | 121583230 |
COG category | [S] Function unknown |
COG ID | [COG3416] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.261005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCCT TGATTTCAAA CCCGGAGCCC TTCATGAATT TGCAAGAACG CGAGCAATTG ACCACTTTCC TGCAGCAACT GGCCCAGGCG CGGGCGGGCG TCAAAGATGA AGAAGCGCAG GCGATGATTG CCAGCACGTT TGCGCGCCAG CCCGATGCGG CCTATCTGGT CGTGCAGCGC GCCTTGCTGC TTGACGCCGC CTTGCAGGAT GCCCAAGCGC AGATTACTCA GCTCAAGGCC CAGCTGGCGC AGCAGCGCCC TGCCCCAGCG GCGTCAAGCT TTCTCGATGC GACCACCTGG GGACGCCAGC CGAGTCCAGC CTTTTCGGCT CCCGTGATGA GCAGCCCGCC TGTTCAGGCG GTTCAAGCTG TTCAGCCGGC AGCCTTTGCC CCGCCTGTCC GTGGATTTCA GGCGCCCGGT TTTCTGTCCA ACATGGCCAC CACGGCTGCG GGCGTGGCCG CGGGCGCATT CCTGTTCCAG GGAATCAACA GTCTGGTGGG CGGCCACCAC AACTCACCGC TTGCGGGAGC CAGTCCCTTG AGTTCACCTG CTGCGGACAA GGAGGCGCCT GCCAACAACT TCCTTGACGC GCCGACTGAC ACCAGCAGCA GCATCCCGGA CAGCAGCGCC GGGTTTAGCG AGTTGCTTGA TATCGGTGGG TCTGACGACT CCAGCGACTG GACTTGA
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Protein sequence | MLPLISNPEP FMNLQEREQL TTFLQQLAQA RAGVKDEEAQ AMIASTFARQ PDAAYLVVQR ALLLDAALQD AQAQITQLKA QLAQQRPAPA ASSFLDATTW GRQPSPAFSA PVMSSPPVQA VQAVQPAAFA PPVRGFQAPG FLSNMATTAA GVAAGAFLFQ GINSLVGGHH NSPLAGASPL SSPAADKEAP ANNFLDAPTD TSSSIPDSSA GFSELLDIGG SDDSSDWT
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