Gene Pnap_4854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4854 
Symbol 
ID4685725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp31290 
End bp32399 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID639826497 
Producthypothetical protein 
Protein accessionYP_973661 
Protein GI121583225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.434428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG TTGCGATGCC TGATGAAGCA GACGCTTTTT CGCTGAACTA CGCCCAGGCG 
CGCGCCAAGT TTCTGGAAGC CGCCGAGACT GCCGGGTTGC ATGTCACGTC CTACCCTCTG
GCCCTGCCCG GCCGCGATGG CGAAGCGCTG GCGGTCGATG CCGCCTGGCA GGGTCCGCGC
CAGGCGACCA AGCTGCTGCT CTTGAGCAGC GGCGTTCATG GCGTGGAGGG ATATGCTGGG
TCGGGTGCGC AAACCGCACT ACTGCAAGAC AGCGCCTGGA TGGAGCAAGT TACCGCCAGC
GGCATACCGG TGATGTATGT GCATGCGCTC AACCCCTACG GCTTTTCGCA CATCCGCCGC
GTGACGCAGG AGAACGTGGA CCTCAACCGA AATTTTCAGG ATTTCACAGC GCCCTTGCCC
TCCAATCCGG CTTACTGCCG GCTTCATCCG CTGTTGCTTC CAGACAAGTG GCCGCCCACC
TGGGGCAACC GCGCTGCCAT CCTCGGGCTC ATCGCGACAA AGGGACTGCG CACCCTCCAA
GTGGCGATTT CCGGCGGCCA GTACGAGCTG CCTGGCAGCA TGTTTTTCGG CGGCGCCGCG
CCCACCTGGA GCCACCGCAC GCTACGCCAG GTTCTGCGCG AACACACGGC CCAGGTGAGG
CAGCTCGCCT GGATTGACCT GCACACCGGC TTGGGGAAAC GCGGGCAGTG CGAGCGGATT
TTCATGGGGT CCAACAACGA TACCGCTGGA TATGCCCGCG CCAATGCCTT GTGGGGCAGG
ACGGCGCCGC TGGTGCAAGC CGGCTCGGCG ACCTCGGTGT CGGCGCCCTT GACCGGGCTG
GTCTGGAATG CCGCCCTGGA GGAATGCCCC CAAGCCGAAT TGACCGGGGT CTGCCTGGAG
TTTGGCACGA AGCCCCTGCT GGAAGTAGCC AACGCGCTGC GCGGCGACCA CTGGCTGCAC
CTGCATCCGC AGACACCTGC CGCGCTGCAG GCGTCCATCA AGCAGCGCCT GTTCGATGCG
TTTTTCGTGA ACACGCCCGA TTGGAAGCGC AACGTCGTGG CTCAAGTGCG TCTGGCTGCA
GCGCAGGCGC TGGACGGGCT GTGCCGTTGA
 
Protein sequence
MENVAMPDEA DAFSLNYAQA RAKFLEAAET AGLHVTSYPL ALPGRDGEAL AVDAAWQGPR 
QATKLLLLSS GVHGVEGYAG SGAQTALLQD SAWMEQVTAS GIPVMYVHAL NPYGFSHIRR
VTQENVDLNR NFQDFTAPLP SNPAYCRLHP LLLPDKWPPT WGNRAAILGL IATKGLRTLQ
VAISGGQYEL PGSMFFGGAA PTWSHRTLRQ VLREHTAQVR QLAWIDLHTG LGKRGQCERI
FMGSNNDTAG YARANALWGR TAPLVQAGSA TSVSAPLTGL VWNAALEECP QAELTGVCLE
FGTKPLLEVA NALRGDHWLH LHPQTPAALQ ASIKQRLFDA FFVNTPDWKR NVVAQVRLAA
AQALDGLCR