Gene Pnap_4814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4814 
Symbol 
ID4685688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp1068 
End bp2318 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content58% 
IMG OID639826457 
Producthypothetical protein 
Protein accessionYP_973621 
Protein GI121583185 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.856348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACCAC CCAAGAACAT TGCCTTGTTC ATCGACGGCA CGTGGGACCA ACCCAATGGG 
GCCATGGATA CCAACGTTCG AAAACTGTTC GAGGCATCCA GGTTCGAGCC GTTTTCTCCG
GCGCCCCAGT TGACCTATTA CCTGCCCGGG GTCGGTACGG ATATAAGCCA AAGCGAACCA
GGCGCACCTG TCGGAAGCTA TGGGGGATAC ATCGACTTCA AGCAGAAGCT CGCAAAGGAG
ATGCCCAGCA GCGTGCTGCT GCTTCGCCCC TTTTTGGGAG GTATTTTTGG TCGCGGGACC
GCTGCACGCA TCAAGGAGGC CTATGCCTAC CTGAGCTGGG AATACGACCA ACGCCGCGGC
GACAAGGTCT TCCTGTTCGG CTTCAGCCGC GGTGCCTTCG CTGCCAGGTC GCTCGCGGGC
TTCATCTCAA AGGTGGGCAT CCTGCTGCGC CACAAACTTC AGTACGTCGA AGAGGCCTAC
AAGTTATATG AGGCTGCTAG CGACGGCACG CAAAGCCGCC TGACCGACTA CCTGGTGCCT
CTTACCGGAA AGCCGTTGCT GCAATCGGGG GAAAGCGAAG ACGCGCTGCG CATTCACTTT
ATTGGCGTCT GGGACACGGT CGGTGCACTG GGCATACCGT GGCGACTGAT GAAGTTCAAG
GCCATGCACA CCGAGTACCA CCAGACGCAA GTCCCGCCCA ACGTGATGAC CGCCCGACAT
GCGCTGGCAC TGCACGAATT GCGCAAGCCC TTTCATCCGA TGCTCTGGTC TGACCCCAAT
GGACACTCAG GACTGCGCCA GGCCTGGTTT CCCGGGGCAC ACGCCGATGT CGGCGGCGGC
TACCTGCTGC ACGAATCGGG ACTGTCCAAC AACGCGCTGA AATGGATGAC CCGGGAGGCC
CAGGCCAAAG GTCTTCAGAT GGAGGCGACC ACCAAGTGGC TGAACGAACA AACCAGCCCC
GAGATGCTGC ATCACCAAAT CCGGAAATGG TTTATTGGGT TCAGGCCAAG GGTTCGGCCT
CAACTGCAGG TGCTTCACGA TGCCTTTAGT GGGGATGCAT CCGAGCTGAG CAATGCCATG
TTTTTTCATG AGAGCACCCG TTTGCATCTG CTCAACCCCG CCGCACGGAA GTACAAGTTT
TTTCGTCCCG GTGTAAACGA CTGTCTCCAA CAGGCAGATG AACTGGCCCT CCAGCTTTTC
GTCAAATCGC GCCTCATGGG CCACGAACCT CTTGGCCAGG TCGAGCCATG A
 
Protein sequence
MEPPKNIALF IDGTWDQPNG AMDTNVRKLF EASRFEPFSP APQLTYYLPG VGTDISQSEP 
GAPVGSYGGY IDFKQKLAKE MPSSVLLLRP FLGGIFGRGT AARIKEAYAY LSWEYDQRRG
DKVFLFGFSR GAFAARSLAG FISKVGILLR HKLQYVEEAY KLYEAASDGT QSRLTDYLVP
LTGKPLLQSG ESEDALRIHF IGVWDTVGAL GIPWRLMKFK AMHTEYHQTQ VPPNVMTARH
ALALHELRKP FHPMLWSDPN GHSGLRQAWF PGAHADVGGG YLLHESGLSN NALKWMTREA
QAKGLQMEAT TKWLNEQTSP EMLHHQIRKW FIGFRPRVRP QLQVLHDAFS GDASELSNAM
FFHESTRLHL LNPAARKYKF FRPGVNDCLQ QADELALQLF VKSRLMGHEP LGQVEP