Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4605 |
Symbol | |
ID | 4685492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | - |
Start bp | 177990 |
End bp | 180455 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639826451 |
Product | nucleotide binding protein, PINc |
Protein accession | YP_973615 |
Protein GI | 121583174 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTG CCGAATTCCG AGCCAGCTAC CCTTTGTTCG AGTTGCAGAG CGAGGTCACA TTTCAAACCC CACGGGCGCC GACGGTGGTC GAACGAATGA TATTGCGCCT GATCGTCACC GCCACGGCGT CAATTGGCGA CATGACGCTG GCCAGCGCGT TCACTGACGT GCTGGGCATG GGGGACGCCC GGCGCGTGCT GACGACCTTC ATCGAACCGT TGTTTGTTCT CGATGTGGTT CTGTGTCCAA CCGGAGAAGA CCCGTTGGAA ATTCCCATTA GGCTTCTGAG TTTGACGGAA ACGGGTCTTG CCTTTTGGTC GCGCAACCTG TTGCCTGGCG CGCCCCAAAC CAAGCGGGTT ACGCACACCT ATGACTTCAT CACCGACACC CTGACGCCTC AAAGAAGGGG CAAGCTGGCG CAGACTGACA ACGCCAGAAC AGAGGATGAG ATTTTTCTCG ACCAGCCACT TCGAGCCAGT GACCTGCAAG CCAGGATCCA TGAAAGCCTG ATACCCGGCA GCCATGAATG GGTGACACGC ACGACAGAGA TCGGTGAGGT GCGCAACAGC GGCGTGTCCA CCAGCTGGCG CAGTGTCGAG TTGCGGCTGG ACTGCAAGCA AGATGGCGTG CTCAGCCTGG ATGCGCCCAA CGACAAGGTG TTTCGCTTGT GGCTTCGGGC GGCGGATCCC GAAAGGCTTT GGACGCAATT GATCGAGCCT GCGCTGGGCA TCGGCAAGGA CACCCCAGAA CCGGAAAATC GGTGGCACCT TCCGATCACA GACGGTAAGC AACGCTTGGA TTTGCGGCAG GCGCAGGCCG TCGAGCTTCT GGCAGGAACG TCCAGCATGC CAGCCAAAGC CCCCTCTTCG GCGGGGACAC TGATGCTTTC GCGTATGTTT ACGCCCGACC AGCCACCCGG CGACTGGGTG CGGCTTCAAG ACGTTGCGCC ATCGTCCTTC CTCTTTGACC TTTTTCGGCA ACGGCGCGAC CGCCCGGCGG CGGGTTCACC CTTGTTGTCG ATTCCTCTGG CACCTTACTT CCCCGCAGGC TTCACCTACC TGACCTTGGC TTCGCCCGGA AAAGTGCCTG ATGTCCGGCT CGAAGGCGCG GCCGATCTAA TCTGGGCAGG CCAGGCCTAC CGCGTGCCCT TGGAACTCAC GCTCGCCGAG GAGCCGGCAG GTATTTTCTG GCGTGCATGT TGCCACGACA TGGAAACAGC CTTGCTGAGC AGGCCACAGG CGGCTTTGCT GCCTGCCATG CTGTGGTGGC AACCGCCGGA CTTTGTAGTG GCGCAGTGGC TCAGCTGTTG TGATGGTCTG GGTCCGCACG ACTGGATCGG GCAGTTGGTC GAGTTCCTCG CCGCCTTGCG CCGACGGCTG GCACTCGCGG CTATTGCGCC GCAGTCCGAC TGGGCCAAGA CCCTGGCCGA AGCGGCCGCA GGCGTTGTGT CCGAGCTCAC GAACCCCGTG GATTTTCCGG AACTCATCGT CTGGCTCGAC CTGCTCAAAA ATGTCAGCTT GGCCCGACCG CAGCTCCAGC AGATCATTCT GGAGAGCGCT GTACAGGTCG AGACACTGGA GGATCTTCAG TTGATCCGGC AGTCGCTCGA CGACGAACGC ATGGTACTGC CCCTGCGCCT GATGGGAAGC AGTGTGCGCC ATGCGCTGAT CGAACAAATG CTGGCGTCCG GCGACACGTC CAAGATTGGT CCCCTCGTGG CGAGCGCCGC TTTGGCACGG CTGAAACAGG TCTATGCCGC CGTGAATGAT CTGCTGGGCG GCGCCTTGAG CGCCAACTCC GCATTGCGGG CCGGCACGGC TTACGCCAAG GCCAGGCGTC AGGCCACCAC GGCTTACAAG TTGCTGAGCG AGTTGAGAAA CTCAATGGAG GACGTACGCA ACGCCCTCCA ACTAGACGAC AAGGCCTACG CCCTGGCGTT TGGCAGGACA CAGGACCGGT TGCAGCACTT CGAACAATGG ATGGACACGC AATTCGCGCC AGCAGAAGAA CCGAACACCC GTCCTGTCGT GATGGATACC AACACCTTGA TTGATTTTCC GACCATCTTT GACCAGCTGG GGCTCAATGA CATTGCCGTG GTGCCCAAGC GTGTCGTTCA AGAGCTGGAC CAACTCAAAA CCAAACCCGA TGCGTCGTCG TCGGGTAGGC GTGCCCACCA GGTCCGCAAA GCTATGCGCT CACTGGACCA AGCGACCGAG GTCCGGTCTC AAGACTCCAT GCCCGAACTT CTGGCCCTGG ACTGGACCAG CACCCCGGAC AACGACATCC TGTCGGCAGC GCTGTTTTAT TCGCGCAGTC CCGTCATTTT GCTCACGGGC GATAAAAACC TGCGTATCAA GGCCAAGGCT GAGGGCATTC GCGCCATGTC GGGAGAGGAG TATCTGCACG AATTCGGGCA GGTCGCCCCG GCACACACCA CAATGGCTCC GGCATCTGCC AGCTAA
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Protein sequence | MKLAEFRASY PLFELQSEVT FQTPRAPTVV ERMILRLIVT ATASIGDMTL ASAFTDVLGM GDARRVLTTF IEPLFVLDVV LCPTGEDPLE IPIRLLSLTE TGLAFWSRNL LPGAPQTKRV THTYDFITDT LTPQRRGKLA QTDNARTEDE IFLDQPLRAS DLQARIHESL IPGSHEWVTR TTEIGEVRNS GVSTSWRSVE LRLDCKQDGV LSLDAPNDKV FRLWLRAADP ERLWTQLIEP ALGIGKDTPE PENRWHLPIT DGKQRLDLRQ AQAVELLAGT SSMPAKAPSS AGTLMLSRMF TPDQPPGDWV RLQDVAPSSF LFDLFRQRRD RPAAGSPLLS IPLAPYFPAG FTYLTLASPG KVPDVRLEGA ADLIWAGQAY RVPLELTLAE EPAGIFWRAC CHDMETALLS RPQAALLPAM LWWQPPDFVV AQWLSCCDGL GPHDWIGQLV EFLAALRRRL ALAAIAPQSD WAKTLAEAAA GVVSELTNPV DFPELIVWLD LLKNVSLARP QLQQIILESA VQVETLEDLQ LIRQSLDDER MVLPLRLMGS SVRHALIEQM LASGDTSKIG PLVASAALAR LKQVYAAVND LLGGALSANS ALRAGTAYAK ARRQATTAYK LLSELRNSME DVRNALQLDD KAYALAFGRT QDRLQHFEQW MDTQFAPAEE PNTRPVVMDT NTLIDFPTIF DQLGLNDIAV VPKRVVQELD QLKTKPDASS SGRRAHQVRK AMRSLDQATE VRSQDSMPEL LALDWTSTPD NDILSAALFY SRSPVILLTG DKNLRIKAKA EGIRAMSGEE YLHEFGQVAP AHTTMAPASA S
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