Gene Pnap_4605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4605 
Symbol 
ID4685492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp177990 
End bp180455 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content61% 
IMG OID639826451 
Productnucleotide binding protein, PINc 
Protein accessionYP_973615 
Protein GI121583174 
COG category[T] Signal transduction mechanisms 
COG ID[COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG CCGAATTCCG AGCCAGCTAC CCTTTGTTCG AGTTGCAGAG CGAGGTCACA 
TTTCAAACCC CACGGGCGCC GACGGTGGTC GAACGAATGA TATTGCGCCT GATCGTCACC
GCCACGGCGT CAATTGGCGA CATGACGCTG GCCAGCGCGT TCACTGACGT GCTGGGCATG
GGGGACGCCC GGCGCGTGCT GACGACCTTC ATCGAACCGT TGTTTGTTCT CGATGTGGTT
CTGTGTCCAA CCGGAGAAGA CCCGTTGGAA ATTCCCATTA GGCTTCTGAG TTTGACGGAA
ACGGGTCTTG CCTTTTGGTC GCGCAACCTG TTGCCTGGCG CGCCCCAAAC CAAGCGGGTT
ACGCACACCT ATGACTTCAT CACCGACACC CTGACGCCTC AAAGAAGGGG CAAGCTGGCG
CAGACTGACA ACGCCAGAAC AGAGGATGAG ATTTTTCTCG ACCAGCCACT TCGAGCCAGT
GACCTGCAAG CCAGGATCCA TGAAAGCCTG ATACCCGGCA GCCATGAATG GGTGACACGC
ACGACAGAGA TCGGTGAGGT GCGCAACAGC GGCGTGTCCA CCAGCTGGCG CAGTGTCGAG
TTGCGGCTGG ACTGCAAGCA AGATGGCGTG CTCAGCCTGG ATGCGCCCAA CGACAAGGTG
TTTCGCTTGT GGCTTCGGGC GGCGGATCCC GAAAGGCTTT GGACGCAATT GATCGAGCCT
GCGCTGGGCA TCGGCAAGGA CACCCCAGAA CCGGAAAATC GGTGGCACCT TCCGATCACA
GACGGTAAGC AACGCTTGGA TTTGCGGCAG GCGCAGGCCG TCGAGCTTCT GGCAGGAACG
TCCAGCATGC CAGCCAAAGC CCCCTCTTCG GCGGGGACAC TGATGCTTTC GCGTATGTTT
ACGCCCGACC AGCCACCCGG CGACTGGGTG CGGCTTCAAG ACGTTGCGCC ATCGTCCTTC
CTCTTTGACC TTTTTCGGCA ACGGCGCGAC CGCCCGGCGG CGGGTTCACC CTTGTTGTCG
ATTCCTCTGG CACCTTACTT CCCCGCAGGC TTCACCTACC TGACCTTGGC TTCGCCCGGA
AAAGTGCCTG ATGTCCGGCT CGAAGGCGCG GCCGATCTAA TCTGGGCAGG CCAGGCCTAC
CGCGTGCCCT TGGAACTCAC GCTCGCCGAG GAGCCGGCAG GTATTTTCTG GCGTGCATGT
TGCCACGACA TGGAAACAGC CTTGCTGAGC AGGCCACAGG CGGCTTTGCT GCCTGCCATG
CTGTGGTGGC AACCGCCGGA CTTTGTAGTG GCGCAGTGGC TCAGCTGTTG TGATGGTCTG
GGTCCGCACG ACTGGATCGG GCAGTTGGTC GAGTTCCTCG CCGCCTTGCG CCGACGGCTG
GCACTCGCGG CTATTGCGCC GCAGTCCGAC TGGGCCAAGA CCCTGGCCGA AGCGGCCGCA
GGCGTTGTGT CCGAGCTCAC GAACCCCGTG GATTTTCCGG AACTCATCGT CTGGCTCGAC
CTGCTCAAAA ATGTCAGCTT GGCCCGACCG CAGCTCCAGC AGATCATTCT GGAGAGCGCT
GTACAGGTCG AGACACTGGA GGATCTTCAG TTGATCCGGC AGTCGCTCGA CGACGAACGC
ATGGTACTGC CCCTGCGCCT GATGGGAAGC AGTGTGCGCC ATGCGCTGAT CGAACAAATG
CTGGCGTCCG GCGACACGTC CAAGATTGGT CCCCTCGTGG CGAGCGCCGC TTTGGCACGG
CTGAAACAGG TCTATGCCGC CGTGAATGAT CTGCTGGGCG GCGCCTTGAG CGCCAACTCC
GCATTGCGGG CCGGCACGGC TTACGCCAAG GCCAGGCGTC AGGCCACCAC GGCTTACAAG
TTGCTGAGCG AGTTGAGAAA CTCAATGGAG GACGTACGCA ACGCCCTCCA ACTAGACGAC
AAGGCCTACG CCCTGGCGTT TGGCAGGACA CAGGACCGGT TGCAGCACTT CGAACAATGG
ATGGACACGC AATTCGCGCC AGCAGAAGAA CCGAACACCC GTCCTGTCGT GATGGATACC
AACACCTTGA TTGATTTTCC GACCATCTTT GACCAGCTGG GGCTCAATGA CATTGCCGTG
GTGCCCAAGC GTGTCGTTCA AGAGCTGGAC CAACTCAAAA CCAAACCCGA TGCGTCGTCG
TCGGGTAGGC GTGCCCACCA GGTCCGCAAA GCTATGCGCT CACTGGACCA AGCGACCGAG
GTCCGGTCTC AAGACTCCAT GCCCGAACTT CTGGCCCTGG ACTGGACCAG CACCCCGGAC
AACGACATCC TGTCGGCAGC GCTGTTTTAT TCGCGCAGTC CCGTCATTTT GCTCACGGGC
GATAAAAACC TGCGTATCAA GGCCAAGGCT GAGGGCATTC GCGCCATGTC GGGAGAGGAG
TATCTGCACG AATTCGGGCA GGTCGCCCCG GCACACACCA CAATGGCTCC GGCATCTGCC
AGCTAA
 
Protein sequence
MKLAEFRASY PLFELQSEVT FQTPRAPTVV ERMILRLIVT ATASIGDMTL ASAFTDVLGM 
GDARRVLTTF IEPLFVLDVV LCPTGEDPLE IPIRLLSLTE TGLAFWSRNL LPGAPQTKRV
THTYDFITDT LTPQRRGKLA QTDNARTEDE IFLDQPLRAS DLQARIHESL IPGSHEWVTR
TTEIGEVRNS GVSTSWRSVE LRLDCKQDGV LSLDAPNDKV FRLWLRAADP ERLWTQLIEP
ALGIGKDTPE PENRWHLPIT DGKQRLDLRQ AQAVELLAGT SSMPAKAPSS AGTLMLSRMF
TPDQPPGDWV RLQDVAPSSF LFDLFRQRRD RPAAGSPLLS IPLAPYFPAG FTYLTLASPG
KVPDVRLEGA ADLIWAGQAY RVPLELTLAE EPAGIFWRAC CHDMETALLS RPQAALLPAM
LWWQPPDFVV AQWLSCCDGL GPHDWIGQLV EFLAALRRRL ALAAIAPQSD WAKTLAEAAA
GVVSELTNPV DFPELIVWLD LLKNVSLARP QLQQIILESA VQVETLEDLQ LIRQSLDDER
MVLPLRLMGS SVRHALIEQM LASGDTSKIG PLVASAALAR LKQVYAAVND LLGGALSANS
ALRAGTAYAK ARRQATTAYK LLSELRNSME DVRNALQLDD KAYALAFGRT QDRLQHFEQW
MDTQFAPAEE PNTRPVVMDT NTLIDFPTIF DQLGLNDIAV VPKRVVQELD QLKTKPDASS
SGRRAHQVRK AMRSLDQATE VRSQDSMPEL LALDWTSTPD NDILSAALFY SRSPVILLTG
DKNLRIKAKA EGIRAMSGEE YLHEFGQVAP AHTTMAPASA S