Gene Pnap_4551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4551 
Symbol 
ID4685541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp117139 
End bp117654 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content58% 
IMG OID639826400 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_973565 
Protein GI121583124 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4454] Uncharacterized copper-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC GCAACATCCT GATCGCCATT CCCGGCATTT TTCTGGCCCT CACGGCCATG 
GCCGCAGGCA ACCACGCCGG GGGCCATGGC GGCGTCGAGG AGATCGGCAA ACCCGGCGTC
GCCGCCAATG TGACGCGTAC CGTCAACGTC GACATGACCG ACGACATGCG CTTTCACACG
TCAAAGATCG CTGTCAAGCA AGGTGAAACC ATCCGCTTTG TCGCCAAGAA TTCCGGCCAG
GTCAAGCACG AAATGGTGCT GGGAACCGCC AAGGAGCTCA AGGACCATTA CGAGGTGATG
AAGAAAAATC CCGAGATGGA ACACGCCGAC GAAAACATGG TCACTGTGGC GCCAGGCAAA
AGCGGTGAAA TCATCTGGCA TTTCACCAAG GCTGGCAAGG TGGACTTTGC CTGCCTGCAG
CCTGGCCATT ACGACGCGGG CATGAAGGGT TCGGTCAATG TTGCTAGCGG CAAAACCCCT
GCCAAAAGGC AAGCTCAGGC TGGGCATGCC CATTGA
 
Protein sequence
MKSRNILIAI PGIFLALTAM AAGNHAGGHG GVEEIGKPGV AANVTRTVNV DMTDDMRFHT 
SKIAVKQGET IRFVAKNSGQ VKHEMVLGTA KELKDHYEVM KKNPEMEHAD ENMVTVAPGK
SGEIIWHFTK AGKVDFACLQ PGHYDAGMKG SVNVASGKTP AKRQAQAGHA H