| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4548 |
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| Symbol | |
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| ID | 4685552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | + |
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| Start bp | 114747 |
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| End bp | 115790 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639826397 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_973562 |
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| Protein GI | 121583121 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.433204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA AAACTAATAA CTGGATTTTG ACAGCGATTC AGCTGGGCCT GCTGGCTTGG
TCCGGCGCCG CTTTAGCGGC TGACAAAGTC TATGTGGCCA ATGAGGGTGC TGACACGGTC
AGCGTGCTCG ATGCCGCGTC GTTCAAGACA CTGGCGAGCG TGCCTGTCGG CAAGTCACCG
CACAACGTGC AGGTATCGCC CGACGGCAAG GTTGTATGGG TCACCAACAA CGGCGAGCCT
AATCAGGTGG CGGCCTCTGT GCATAAGGAA ATGGTCAAAA GTGAACACAG CGCGATGGCG
ACAGCAGGAG CCGTTTGGGC CATTGATACC AGTAGTAACG CGGTAATCGC CAAGGTGCCG
GTCGGCCCTC ACCCGGCTCA TGTGGTGGTG TCACCAGACG GGCGCTTTGC CTATATCACC
AATGGCGGCG ACAACACGGT CAGTGTGGTT GACACATCGG CGCGACGCGT GGTCGCCACG
ATTCCGGTCG GCAAGTTTCC CCACGGCCTT CGCATCAGTC CGGACGGCAA GCAGGCCTAT
GTCGCCAACC TCAAGGGCGG CACGGTCTCG GTGATTGATA CCGCCAGCCA AAAGGAAGTC
GCGCAAATTC CGGCAGGCAA GGGGCCGGCC CAGGTCGGCT TCACACCGGA CGGTCGCCTT
GTCTTGGTCT CGCTGTCGGA AGAAAACGCA GTCGCTGTGA TCGACTCCAC CACGCGAAAG
GTGATTCGCA AGGTCGCGGT CGGAACGGTC CCCATCCAGC TGTACGCCAC GCCGGACTCG
CGCACGTTTC TGGTAGCCAA CCAAGGCTCG CCCAAGAAAC CTGGCAAAAC TGTCAGCTTG
ATCAACTTGG AGAGTTTCAA GGTCGTCAAG ACCGTCATGA CCGGCGCCGG TGCTCATGGC
GTGGTCGTCG ATCGTGATGG CAGGTATGCC TACGTGACCA ACACTTACGC CAACTCGGTT
TCCGTGGTCG ATGTGAAGGA CCGCAAGGTC GTCAAGACCG TTCCTGTGGG CAAGGGCCCC
AACGGCATCA GCGTGACGCC TTGA
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| Protein sequence | MMKKTNNWIL TAIQLGLLAW SGAALAADKV YVANEGADTV SVLDAASFKT LASVPVGKSP
HNVQVSPDGK VVWVTNNGEP NQVAASVHKE MVKSEHSAMA TAGAVWAIDT SSNAVIAKVP
VGPHPAHVVV SPDGRFAYIT NGGDNTVSVV DTSARRVVAT IPVGKFPHGL RISPDGKQAY
VANLKGGTVS VIDTASQKEV AQIPAGKGPA QVGFTPDGRL VLVSLSEENA VAVIDSTTRK
VIRKVAVGTV PIQLYATPDS RTFLVANQGS PKKPGKTVSL INLESFKVVK TVMTGAGAHG
VVVDRDGRYA YVTNTYANSV SVVDVKDRKV VKTVPVGKGP NGISVTP
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