Gene Pnap_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4540 
Symbol 
ID4685561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp107616 
End bp108266 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content54% 
IMG OID639826390 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_973555 
Protein GI121583114 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG ATACCCCTGC CTACGGACTA TGGTTGCTGG TCATCTTTAA TTCGGCCATC 
TTCCTGATGT TTGCATTCAG CTTCTTTAAA CCCCAGACAG CACGAGACTG GCGAACCTTT
GGCGCATTTG CCGCCTTCAT TGTTGCGCTC TTCGTCGAGA TGTATGGCTT TCCGCTGACC
ATCTATTTCA TGTCTGGCTG GCTGCAGACC AAGTTCCCGA GCATCGATCT GCTGTCTCAC
AACTCCGGCC ATCTCTGGTC AACACTTTTG GGGGAGAAGG GTGATCCCCA TTTCGGGGTA
CTGCATATCG CCAGCTACGT GTTCCTAGGA TTTGGCTTTT ACCTGTTGTC CAGTGCCTGG
AACGTGCTGT ACCACGCGCA ACGCCAGCAT GCATTGGCTA CGGCAGGCCC TTATGCTCGC
ATTCGCCATC CGCAATACCT GGCTTTCGTC TTAATTCTGT TGGGTTTCCT GCTGCAATGG
CCAACGCTGC TCACGTTGGT GATGTTTCCC ATCCTGCTGG TGATGTATGG GCGGCTCGCG
ATCACGGAAG AGTCTGAAAT GCGTAAGCGG TTCGGCGCTG AATTTGAAGC CTACGCAACG
AGCACGCCAC GCTTCGTGCC GTCATTGCGA AACAAAACGT CGGTTGCCTG A
 
Protein sequence
MTHDTPAYGL WLLVIFNSAI FLMFAFSFFK PQTARDWRTF GAFAAFIVAL FVEMYGFPLT 
IYFMSGWLQT KFPSIDLLSH NSGHLWSTLL GEKGDPHFGV LHIASYVFLG FGFYLLSSAW
NVLYHAQRQH ALATAGPYAR IRHPQYLAFV LILLGFLLQW PTLLTLVMFP ILLVMYGRLA
ITEESEMRKR FGAEFEAYAT STPRFVPSLR NKTSVA