| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4528 |
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| Symbol | |
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| ID | 4685563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | + |
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| Start bp | 99937 |
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| End bp | 101208 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639826378 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_973543 |
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| Protein GI | 121583102 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.050595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCG TGCCGGCCAT CCCGGCTGGC ATGCCCGAGC CACAAGCCCT TCGCCCGAGG
CAACTGGCGC TTCTGGCTGC AGCGATTTTT GTCGTTTCGG CTGGATACGG CGGGTTGTTG
CCCGTGCTAC CTGCCTGGCT GGCGCAGCAG ATGCCGCAAG CCAATGCTGT TGAAGTGGCG
CGGCATGTCG GGTTCCTGAG TGGCGCTTAT GCGGCCGGTG TGCTGGTAGG CGCCCCCCTA
TGGGGAATGG TCTCGGACCG CGTGGGGCGT CCTCGCATCC TTGTGAGCGG CATGGTTGGT
TATGTTGTGA GCCTGTTGCT GCTGCTTGTA CCAACACTGA GTAGTCTATC TGCCATTTAT
GTGTTGCGCG CTGCTGCCGG GCTGTGCGTG GCCGCTGTGG TACCGGTCGT TTCGGCGCTC
GTCGCTGAGC ATACCCCGCA GGCACTGCGG GCACGGCGCT TTGCCTGGCT AACTGCGGCC
TCGCTGATCG GCTTTTTGTT CGGGCCGGCG CTGAACGCCC TGGCCGATGG CCTGGCTGGT
TGGCTAAGAA GTGGTGGCAA CCAGGCGCCC CTTTCGGCAA GCCTCGTTGT CGTCCTATCT
GCCGGACTAG GGGCCGTGAT CATGCTCGGG CTTGCCTGGA CGTTGCCAGT TCGCCAGTTA
CCGAAGTCCA AAATTGTTCC CGGTCCGACG AGACAGCGTG GTATTGCAGC GCTACTTTGG
CTCAGTGGTG CGGTCATGTT TGTGCTGTCC GGCTTCGAAC TTGGCATTGT GTTGCAAGGG
CAGCAGCACG CCAACTTGAC GACCCAGCAG ATCGCGCTGA TGTTCGCTGA ATGCAGCTTG
GTGATGCTGA TCATCAACGC CATGCTGTTC TTTACTTCAC TGCTTGACAA GGTGCCTGCC
CGCGTTGTGA TTGCGTTTGG GCTGTTGATC GGCATGGCAG GTTTGGCGAT CATGGCGCTG
CACCGCTCCG ACAGCTGGAT GTATTTGGGT GTCAGCCTGA CATCGGCCGG GACGGGGCTG
GTCCTTCCCG TCATCACTTT CCTTGCGGCC GGGGCTACGC GCCAAAAGCT GGGCGCCACA
ATGGGCGGAC TCGCGGCGGC GGCCGGCTTT GGCCAGACGC TCGGTTCAGC GGCCGGAGGC
TGGCTGTTTG GCGCGGTGGC ACAACAGAGC TTTGGCTGGC TCACGCTGCC GCTGGTCCTT
ACGCTGTTTA TGCTGCTGGC ACGCCCTGGC TGGTGGGGCC AGCAACCGCT GCGCGAGGAA
GCCGATGCTT GA
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| Protein sequence | MSAVPAIPAG MPEPQALRPR QLALLAAAIF VVSAGYGGLL PVLPAWLAQQ MPQANAVEVA
RHVGFLSGAY AAGVLVGAPL WGMVSDRVGR PRILVSGMVG YVVSLLLLLV PTLSSLSAIY
VLRAAAGLCV AAVVPVVSAL VAEHTPQALR ARRFAWLTAA SLIGFLFGPA LNALADGLAG
WLRSGGNQAP LSASLVVVLS AGLGAVIMLG LAWTLPVRQL PKSKIVPGPT RQRGIAALLW
LSGAVMFVLS GFELGIVLQG QQHANLTTQQ IALMFAECSL VMLIINAMLF FTSLLDKVPA
RVVIAFGLLI GMAGLAIMAL HRSDSWMYLG VSLTSAGTGL VLPVITFLAA GATRQKLGAT
MGGLAAAAGF GQTLGSAAGG WLFGAVAQQS FGWLTLPLVL TLFMLLARPG WWGQQPLREE
ADA
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