Gene Pnap_4525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4525 
Symbol 
ID4685578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp95459 
End bp96223 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content56% 
IMG OID639826375 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_973540 
Protein GI121583099 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA AAGGTAAAAA TGGGCTTGTA GTAGGAATCG CCAATTCGCA TTCAATTGCG 
TGGGGTTGCG CTCAGGCGTT TCATCAGGCT GGCGCCTCGC TTGCGGTTAC CTACCTCAAT
GAAAAGGCGC TTCCGTTTGT GCAACCTCTC GCAGAGCAGC TTGACGCGGC ACTGATCCTT
CCCCTGGATG TACGTGATGA CGCGCAATTG GAAGCTGTTT TTGTCGCTAT TGATCAGAAG
TGGGGAAAAC TCGATTTCCT GCTTCATGCA GTCGCCTATG CGCCTAAAAG CGATATGGAA
GGTCGTATGG CAGACACATC GAGGCAAGGT TTTCTTGAGG CGATGAACAT TTCCTGTTAC
TCCTTCGTCC GCATGGCTCA TCTGGCCGAA CCGCTTATGC AAAACGGGGG ATGCTTGCTG
ACCACGACCT ACTATGGCAG CGAAAAAGTC ATTTCACATT ACAACGTGAT GGGGCCGGTT
AAGGCCGCGC TCGAAAGTAC AGTTCGGTAT CTCGCCGCCG ACCTGGGCCC GCGCCACATT
CGCGTCAATG CTCTCTCGCC GGGGCCGATC GTCACCCGTG CGGCAAGTGG CATTGCGCAC
TTCGATGAGC TGGTGCAACT CGCACGCGAA AAATCCCCGG CGCACGAGGC GGTCTGCATC
GATTGCGTCG GCGCTTACGC TAGCTTCCTC GTGAGCGACG GCGCTCGCCT GGTAACGGGC
AGCATCGCTT ATGTCGATGC GGGCTTCAAT GTCATGGGGT CCTAA
 
Protein sequence
MTLKGKNGLV VGIANSHSIA WGCAQAFHQA GASLAVTYLN EKALPFVQPL AEQLDAALIL 
PLDVRDDAQL EAVFVAIDQK WGKLDFLLHA VAYAPKSDME GRMADTSRQG FLEAMNISCY
SFVRMAHLAE PLMQNGGCLL TTTYYGSEKV ISHYNVMGPV KAALESTVRY LAADLGPRHI
RVNALSPGPI VTRAASGIAH FDELVQLARE KSPAHEAVCI DCVGAYASFL VSDGARLVTG
SIAYVDAGFN VMGS