| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4519 |
|---|
| Symbol | |
|---|
| ID | 4685574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008758 |
|---|
| Strand | + |
|---|
| Start bp | 90140 |
|---|
| End bp | 90808 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639826369 |
|---|
| Product | isoprenylcysteine carboxyl methyltransferase |
|---|
| Protein accession | YP_973534 |
|---|
| Protein GI | 121583093 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.105752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATG ACACCCCCGC CTACGGACTT TGGATGCTCG TCGTCATCAA TTCGGCTATT
TTCATCATGT TTGCCTACAG TTTTTTCAAA CCGGCAACGG CGCGGGACTG GCGGACCTTT
GGATCTTTTG CCGCTTTTGT CGTGGCCTTG TTCGTCGAGA TGTATGGTTT TCCTTTGACC
ATCTACCTGC TTTCAGGATG GCTGCAGACC AGGTATCCGG GCCTGGATCT GCTCTCACAC
GATACCGGTC ACCTGTGGTC GACTTTGCTG GGTGAAAAAG GTGATCCGCA CTTTGGTGTC
CTGCATCTTG CCAGCTACCT CTTTCTGCTC GGAGGTTTTA TCCTGCTGTC CAGCGCCTGG
AATGTGCTGT ACCACGCACA GCGGCAGCAT ACGCTGGCGA CCACCGGGCC TTATGCCGTG
ATTCGCCATC CCCAGTACGT GGGGTTTGTT TTGATCCTGC TTGGTTTTTT GTTGCAGTGG
CCGACGCTGC TGACTCTGGT CATGTTCCCC GTCCTGCTGG TGATGTATGG GCGCCTGGCG
CTGACAGAAG AGGCCGAGAT GCGCGCGCAA TTTGGCGAAG CGTTCGAGCG TTACGCCCAG
CGCACGCCCC GGTTTATCCC TCGCATGGGC AAGGCCGAGC CGACAGCTGA CTCGGTGTCC
AAAAGATGA
|
|---|
| Protein sequence | MNHDTPAYGL WMLVVINSAI FIMFAYSFFK PATARDWRTF GSFAAFVVAL FVEMYGFPLT
IYLLSGWLQT RYPGLDLLSH DTGHLWSTLL GEKGDPHFGV LHLASYLFLL GGFILLSSAW
NVLYHAQRQH TLATTGPYAV IRHPQYVGFV LILLGFLLQW PTLLTLVMFP VLLVMYGRLA
LTEEAEMRAQ FGEAFERYAQ RTPRFIPRMG KAEPTADSVS KR
|
|---|
| |