| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4505 |
|---|
| Symbol | |
|---|
| ID | 4685588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008758 |
|---|
| Strand | - |
|---|
| Start bp | 76277 |
|---|
| End bp | 76939 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639826355 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_973520 |
|---|
| Protein GI | 121583079 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCGC CCCAGGCCAA CGCTCAATTC GTGGCCGCCA TGGAAAAGGT GCTGGACATC
TACAGCCGGC CTTACGATGC GAAGCACCCC GTGGTGTGCA TGGACGAGAC GCCTCGCCAA
CTCATTCGCG AGACGCGCGA GCCCATTGCA GTGGCGCCCG GCCGGCCCGA GCGCCATGAC
TACGAGTACG AACGCTGCGG CGTGTGCAAC GTGTTCATGG CCAGCGAGCC GCTGGCCGGT
CTGCGCCTGA CCAAGGTCAC CGAGCGGCGG ACCAAACTGG ACTGGGCGGT GTTCGTGCAA
GACATCGCTG AAAGCTACCT TGACGCCGAG CGCATCACGT TGGTGATGGA CAACCTGAAT
ACGCACACGC CGGCCTCGCT GTACGAGGCG TTTACCCCGG AGAAAGCCAA GGCGCTGTGG
GACCGCTTCG AGTTTGTCTA CACCCCGAAG CACGGCAGCT GGCTGAACAT GGCAGAAATT
GAGATCAATG TCATGGTGAG CCAGTGTCTG GATCGGCGCA TCGACAACAT CGAGACCGTG
CGAAGCGAAG TCGCTGCCTG GCAAGCCCTC CGCGACAACC GTCAGGCCAA AGTCAACTGG
CAATTCACCA CCAAGGATGC CCGCGTCAAA CTCAAACGGC TTTACCCGAC AAATTTTTCA
TGA
|
|---|
| Protein sequence | MIAPQANAQF VAAMEKVLDI YSRPYDAKHP VVCMDETPRQ LIRETREPIA VAPGRPERHD
YEYERCGVCN VFMASEPLAG LRLTKVTERR TKLDWAVFVQ DIAESYLDAE RITLVMDNLN
THTPASLYEA FTPEKAKALW DRFEFVYTPK HGSWLNMAEI EINVMVSQCL DRRIDNIETV
RSEVAAWQAL RDNRQAKVNW QFTTKDARVK LKRLYPTNFS
|
|---|
| |