Gene Pnap_4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4489 
Symbol 
ID4685604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp54236 
End bp54673 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID639826339 
Productheavy metal transport/detoxification protein 
Protein accessionYP_973504 
Protein GI121583063 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2608] Copper chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.485283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0949598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA GCTCCATTGA AGTGCACGAC ATGCTGTCGG TATTGAGCGT CGACGAAGTC 
GAAAAGCGAA TCGGCGAGGT GCCCGGTGTC CAGAGCGTGA CCGTGAACTT TGCGGCCGGC
AGCGCTACCG TGCGCTATGA CGAGACACAG CTCGAAGCGA CCGATATCAA GTCGGCCGTG
CGCCAACGCG GCCATGACGC GGCCACGCCC GCTGGTACCG CACTGAAAGA GGGGCACGCT
GGACATGCAC CACCTGCCGC GCCGTCCGAA TCCCCCAAGT CGGCAGCACC GACGAGTGCC
CCGGGCGCAC CAGCGGCCAC GGGTCCTGCC GATGCGGCAC CGCCGGACCC GGCAGCGCCA
TCGACCACGC CAGATGCGCC GGATGCTGCG CCTGCGGGCG ATGCCCAAGC AGACAAAACT
GCAGCCGAGA AAGGTTAG
 
Protein sequence
MKTSSIEVHD MLSVLSVDEV EKRIGEVPGV QSVTVNFAAG SATVRYDETQ LEATDIKSAV 
RQRGHDAATP AGTALKEGHA GHAPPAAPSE SPKSAAPTSA PGAPAATGPA DAAPPDPAAP
STTPDAPDAA PAGDAQADKT AAEKG