Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4488 |
Symbol | |
ID | 4685603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | + |
Start bp | 53352 |
End bp | 54212 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639826338 |
Product | hypothetical protein |
Protein accession | YP_973503 |
Protein GI | 121583062 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.521418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0804877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA AGGAACACAA GGACGAGCAC CACGGTGCGT CCAGCGACCA CCGCAACCTG TCTGCCGCGC CCGCAGTGGA CGCGGTGGAC GAGAAGTTGG CGATCTCGTC CAAGCAATAC CACGCGCAGC TTCATCTTCT GCAGGTCGAG TTGGTGAAGC TGCAGCGTCA CTTCATCGGA TGCGGCGACA AGATTCTGGT GCTGGTCGAG GGCCGCGACG CCGCCGGCAA GGACGGCAGC ATCAAGCGCA TCGTCAAACA CCTGAGCCCT CGGGAGACGC GTGTGGTCGC GCTCGGCAAG CCCTCCGACC GGGAACTGCG CAGCTGGTAC TTCCAGCGCT ACATCGCCCA ACTCCCGGTG GCCGAGGAGT TCGTCCTCTT CAACCGCAGT TGGTACAACC GCGCTGGTGT CGAGCACGTC ATGGGCTTTT GCTCCAAGGA AGAGCATGAA GAGTTCATGC TTTCGGTGCC GAAGTTCGAG GAGATGCTGG TCAACTCGGG CATCAAGGTG CTTAAGTATT ACCTCGACAT CGACAAGGAC GAACAGGTGA AACGCCTGGC TGAACGCCAC AGCGACCCGC TCAAGCAATG GAAATCCAGC CCCATTGATG CCGTAGCGGT CCAGCACTGG AAGGCGTATT CGGCAGCACG CGACGCGATG CTGCTGCGCA CCCATACCGC CATCGCGCCG TGGCACATCG TGCGGACGAA CAACAAGCGA TTGGCGCGCT TGAACCTGAT CCGCGACATC TTGTCCCGGC TCCACTACGC TGGCAAGAAG AACAAGCTCG TCCAGCCCGA TGCAGACGTT GCGTTTGAGT TCACGCCCGA CTGTATCGGG TCACAGCGCC TGGCTCGCTG A
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Protein sequence | MSKKEHKDEH HGASSDHRNL SAAPAVDAVD EKLAISSKQY HAQLHLLQVE LVKLQRHFIG CGDKILVLVE GRDAAGKDGS IKRIVKHLSP RETRVVALGK PSDRELRSWY FQRYIAQLPV AEEFVLFNRS WYNRAGVEHV MGFCSKEEHE EFMLSVPKFE EMLVNSGIKV LKYYLDIDKD EQVKRLAERH SDPLKQWKSS PIDAVAVQHW KAYSAARDAM LLRTHTAIAP WHIVRTNNKR LARLNLIRDI LSRLHYAGKK NKLVQPDADV AFEFTPDCIG SQRLAR
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