Gene Pnap_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4488 
Symbol 
ID4685603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp53352 
End bp54212 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID639826338 
Producthypothetical protein 
Protein accessionYP_973503 
Protein GI121583062 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.521418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0804877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA AGGAACACAA GGACGAGCAC CACGGTGCGT CCAGCGACCA CCGCAACCTG 
TCTGCCGCGC CCGCAGTGGA CGCGGTGGAC GAGAAGTTGG CGATCTCGTC CAAGCAATAC
CACGCGCAGC TTCATCTTCT GCAGGTCGAG TTGGTGAAGC TGCAGCGTCA CTTCATCGGA
TGCGGCGACA AGATTCTGGT GCTGGTCGAG GGCCGCGACG CCGCCGGCAA GGACGGCAGC
ATCAAGCGCA TCGTCAAACA CCTGAGCCCT CGGGAGACGC GTGTGGTCGC GCTCGGCAAG
CCCTCCGACC GGGAACTGCG CAGCTGGTAC TTCCAGCGCT ACATCGCCCA ACTCCCGGTG
GCCGAGGAGT TCGTCCTCTT CAACCGCAGT TGGTACAACC GCGCTGGTGT CGAGCACGTC
ATGGGCTTTT GCTCCAAGGA AGAGCATGAA GAGTTCATGC TTTCGGTGCC GAAGTTCGAG
GAGATGCTGG TCAACTCGGG CATCAAGGTG CTTAAGTATT ACCTCGACAT CGACAAGGAC
GAACAGGTGA AACGCCTGGC TGAACGCCAC AGCGACCCGC TCAAGCAATG GAAATCCAGC
CCCATTGATG CCGTAGCGGT CCAGCACTGG AAGGCGTATT CGGCAGCACG CGACGCGATG
CTGCTGCGCA CCCATACCGC CATCGCGCCG TGGCACATCG TGCGGACGAA CAACAAGCGA
TTGGCGCGCT TGAACCTGAT CCGCGACATC TTGTCCCGGC TCCACTACGC TGGCAAGAAG
AACAAGCTCG TCCAGCCCGA TGCAGACGTT GCGTTTGAGT TCACGCCCGA CTGTATCGGG
TCACAGCGCC TGGCTCGCTG A
 
Protein sequence
MSKKEHKDEH HGASSDHRNL SAAPAVDAVD EKLAISSKQY HAQLHLLQVE LVKLQRHFIG 
CGDKILVLVE GRDAAGKDGS IKRIVKHLSP RETRVVALGK PSDRELRSWY FQRYIAQLPV
AEEFVLFNRS WYNRAGVEHV MGFCSKEEHE EFMLSVPKFE EMLVNSGIKV LKYYLDIDKD
EQVKRLAERH SDPLKQWKSS PIDAVAVQHW KAYSAARDAM LLRTHTAIAP WHIVRTNNKR
LARLNLIRDI LSRLHYAGKK NKLVQPDADV AFEFTPDCIG SQRLAR