Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4484 |
Symbol | |
ID | 4685617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | + |
Start bp | 49497 |
End bp | 49931 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639826334 |
Product | transposase, IS4 family protein |
Protein accession | YP_973499 |
Protein GI | 121583058 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.604726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00217113 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTTCCCA TTGCTCGCCA GCGCTCTGAG GCAACCCTGA CGGCGTACCG CACCGGCAAA AGCGACCTGG CCGCCGCGCT GTCAGCTCGG CGCGACGAAA CCGCTATCAC GCTGGGCGCG GACAAAGGCT ATGACGCGCA GGAGTTCATC GAGGCCTGCC TGTCGATGGG CGTCACGCCG CATGTGGCGC AAAACACTTC AGAGCGGCGC TCGGCCGTGC CCGATGCGAT TGCCCAAATT GAAGGCTACG CCATCTCGCA ACAAAAAAGA AAGCTCATCG AGCAGGGATT TGGCTGGGCC AAAACAGTGG GCGGGATTCG CCAGGTGATG GTGCGTGGCC TGGAACGCGT GGACCAGATG TTTGTGCTGA CGATGGCCGC CTACAACCTC ACGCGCATGC GCACGTTGGG ACAAATCCGT CTGCAGGGGC AATAA
|
Protein sequence | MLPIARQRSE ATLTAYRTGK SDLAAALSAR RDETAITLGA DKGYDAQEFI EACLSMGVTP HVAQNTSERR SAVPDAIAQI EGYAISQQKR KLIEQGFGWA KTVGGIRQVM VRGLERVDQM FVLTMAAYNL TRMRTLGQIR LQGQ
|
| |