Gene Pnap_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4484 
Symbol 
ID4685617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp49497 
End bp49931 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID639826334 
Producttransposase, IS4 family protein 
Protein accessionYP_973499 
Protein GI121583058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.604726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00217113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTCCCA TTGCTCGCCA GCGCTCTGAG GCAACCCTGA CGGCGTACCG CACCGGCAAA 
AGCGACCTGG CCGCCGCGCT GTCAGCTCGG CGCGACGAAA CCGCTATCAC GCTGGGCGCG
GACAAAGGCT ATGACGCGCA GGAGTTCATC GAGGCCTGCC TGTCGATGGG CGTCACGCCG
CATGTGGCGC AAAACACTTC AGAGCGGCGC TCGGCCGTGC CCGATGCGAT TGCCCAAATT
GAAGGCTACG CCATCTCGCA ACAAAAAAGA AAGCTCATCG AGCAGGGATT TGGCTGGGCC
AAAACAGTGG GCGGGATTCG CCAGGTGATG GTGCGTGGCC TGGAACGCGT GGACCAGATG
TTTGTGCTGA CGATGGCCGC CTACAACCTC ACGCGCATGC GCACGTTGGG ACAAATCCGT
CTGCAGGGGC AATAA
 
Protein sequence
MLPIARQRSE ATLTAYRTGK SDLAAALSAR RDETAITLGA DKGYDAQEFI EACLSMGVTP 
HVAQNTSERR SAVPDAIAQI EGYAISQQKR KLIEQGFGWA KTVGGIRQVM VRGLERVDQM
FVLTMAAYNL TRMRTLGQIR LQGQ