Gene Pnap_4481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4481 
Symbol 
ID4685612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp46898 
End bp48223 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content68% 
IMG OID639826331 
Producthypothetical protein 
Protein accessionYP_973496 
Protein GI121583055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.579978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000396419 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTGGG CGGAGCACGA ATTCGAGACG ATTGATTTGG GCGACCCGCG TCTGAACCGG 
CGCGCCGTGC TGCTGGCCGA GCGGCTGGGG CAAAAGCCCG GTGCGAGCAT TCCCGGGGCG
TGCGAGAACT GGGCCGAGAC GGCGGCGGCC TACCGCTTCC TGCGCAACGA GCAGGTCAGC
TGTGAAGACG TGATGGCGGC CCACCGCCAG GCGACGGTGG CGCGCATGCG CGAGCACGCG
GTGGTGCTGT GCCTGCAGGA CACGACCGAG CTGGACTACA ACGGCCAGGC GACGGTGGGC
CTGGGGCCGC TGAGCTACGA GGCGCAGCGC GGATTGCTCC TGCACCCGAC CTACGTGGTC
ACGCCCGAGC GCGAGCCGCT GGGGGTGATG AACGCCTGGA CGTGGGCGCG TGAATTCAAG
CAAGGCGACG CGCCGCGCGG CGGCGTACTT GAAAGCGTGC GCTGGATAGA GAGTTACGAG
CGCATCGCCG AGCAGGCCAG CGAGCTTCCC GGCACGCGTC ATGTGTGCAT CGGCGACCGC
GAGTCGGACA TGCTGGCGCT GCTGGTGATG GCGCGCAAGA TGGACCATGC GGCCGACTAC
CTGGTGCGCT GTCAGCACAA CCGGGTGCTG CCCGAAGGGG GCAAGCTGTG GGACGAGGTC
ATGGCCGGCG CGCCGCTGGG GCGTATACGC TTTGAGATGC CGGCTGGGCG CGGGCGCAAG
GCCCGCGCGG TCGAGCAGGA GGTGCGCGCC CGGCGTGTCC TGCTGCCCGA CCGCCAGGGC
GGCGAGCTGG AAGTGACCTG CCTGATTGCC TCGGAGGTCA ATGCGCCGGC AGGCGCCAAG
CCGGTGGTCT GGCGGCTGCT GACCAACCGG GTGGCATCCA CGCTGCAGGA CGCAGTGGAG
CTCATCAATT GGTACCGCGC TCGATGGGAA ATTGAGCTTT TTTTCTTGGT GCTCAAGGAG
GGCTGCCGGG TCGAGCGCTT GCAGCTGGCC GACACCGAGC GGCTGCAGAC CGCGCTGGCG
CTGTATATGG TGATTGCCTG GCGCATCAAC CGCCTGATGC GGCTGGGACG CACGTTGCCC
GACTTACCGG CAGACCTGTT GTTCGAGCCC GACGAGTGGC GAGCGGCGTT CATCCTGAAC
AAAAAGCCCG TGCCCCGGCA GACTCCCCCA CTCAACACCG TGGTGCGCCT GATTGCCCAG
CGCGGCGGCT TTCTGGGCAG AAAGCACGAT GGCGAACCGG GCGCCAGGAC GATTTGGCTG
GGCATGCAGG AGATTGCCGT CTTCGTCGAG GGTGCCCGTT ATGCACGCCA GCTCAACGAT
GGGTGA
 
Protein sequence
MGWAEHEFET IDLGDPRLNR RAVLLAERLG QKPGASIPGA CENWAETAAA YRFLRNEQVS 
CEDVMAAHRQ ATVARMREHA VVLCLQDTTE LDYNGQATVG LGPLSYEAQR GLLLHPTYVV
TPEREPLGVM NAWTWAREFK QGDAPRGGVL ESVRWIESYE RIAEQASELP GTRHVCIGDR
ESDMLALLVM ARKMDHAADY LVRCQHNRVL PEGGKLWDEV MAGAPLGRIR FEMPAGRGRK
ARAVEQEVRA RRVLLPDRQG GELEVTCLIA SEVNAPAGAK PVVWRLLTNR VASTLQDAVE
LINWYRARWE IELFFLVLKE GCRVERLQLA DTERLQTALA LYMVIAWRIN RLMRLGRTLP
DLPADLLFEP DEWRAAFILN KKPVPRQTPP LNTVVRLIAQ RGGFLGRKHD GEPGARTIWL
GMQEIAVFVE GARYARQLND G