| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4479 |
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| Symbol | |
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| ID | 4685487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | - |
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| Start bp | 43641 |
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| End bp | 46463 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639826329 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_973494 |
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| Protein GI | 121583053 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00000467097 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTCGC AACAGAAGGC AGCCCCAGCA ATGACCGAGC CAGCAGCACC CAATGACCCT
TCCTTGCAAG ATGCGGGCGA CCTGGCGCAA AGCCTGGACA CGGACCTCGA CAAGGGTCTC
ACGGCGCAAG AAGCAGCCCG CCGGCTGGCG CACGACGGCC CGAACGAGCT GCGCGCGGCG
CCGCAAGTGC CCGCATGGCG CCGCCTCCTG GGGCAGTTCC AGGACCCGCT GATCTACCTG
CTGCTGGCAG CCATCGCGGT GGCACTGGTC GCCTGGGGGA TCGAAGGGCG CGTAGGCTGG
CCGGTCGATG CGAGCGTGAT CGCAGCCATC GTGCTGCTCA ACGGCGTGCT CGGCTACGCC
CAGGAGGCCA AGGCCGAGAA CGCTGTCGCC GCACTGGCCC GGATGACGGC GGTGACGTCA
GCGGTGGTGC GGGGCGGCCA GACCACCCAG ATCCCCAGCG CGCAACTGGT GCGCGGAGAT
CTGCTGGTCC TCGCCGAAGG CGACGCCGTG GGGGCTGATG CGCGCCTGGT GCGCGCCGCG
TCACTGCGCG TGCAGGAGGC GTCGCTCACC GGCGAGAGCG AAGCCGTGCT CAAGGACGCG
GCTACGCTGG CGCAGCCGAG CGCGCTGGCC GACCGGCTCA ACATGGTGTT CAAGGGGACC
GCAGTGGCTC AGGGCACTGC ACTGGCCGTG GTCACGGCCA CCGGCATGGC CACGCAGATG
GGCTCGATCG CCCAGATGCT CGACAGCACC CGGGAAGAAC CCACGCCGCT GCAAAAGGAG
GTCGCGCGGA TCGGCCGCAT GCTGGGCATC GCCGTGGTCA TCATTGCTTT CGTGGTCATG
GCCACCGTGC TCCTGGCCTT CGAGGTGCGC ACAAGCGCCG ACCTCATCAC GGTGCTGCTG
CTGGGCGTGT CGCTGGCCGT GGCAGCGGTG CCCGAGGGGC TGCCGGCCAT CTTGTCCGTG
GTGCTGGCCA TGGGCGTGCA GCGCATGGCC AGGCGCCATG CGATCGTCAA GCAGCTGTCC
TCCGTGGAGA CGCTGGGCTC GGCCTCGGTC ATCTGCTCGG ACAAGACCGG AACGCTCACG
CGCTCGGAGA TGACGATCGA GCGGGTGATG ACCGCCTCGG GCAGCACCCA CGTGACGGGT
GTCGGCTACA CGCCGAACGG ACGGGTGGAG CACCAGGGCG CCGAGTTGGG CGCCGGTGCG
CTGCACGCCG AACACATCGT GGTGCTCAGC GGGGGCAGCC TGGCGAGCAA TGCCGACCTG
CGCCAGTTGG GGGACGGCAC ATGGGAAATC CAGGGAGACC CGACCGAAGC GGCGTTTCTG
GTGGCCGAGC GCAAGCTGGG CGTGCAGGCG CGGCGCCAAC AGCGCTTCGA GCGCGTGGCC
GAGCTCCCAT TCACCTCCGA GCGCAAGATG ATGTCCACGA TCGAGCGCGA CCACGAGCAC
GGCGATGCGT TGATGGTGAT CACCAAGGGC GCGCCCGACG TGCTGCTCGC ACGCTGCACC
CGCGTGCGCG TGGGGTTGGA CGTCCTTCCC TTCGATGACG CGCTGCGCGC GCGGGCTTTG
GGCGATGTGG ACCGGCTCTC TGGCGAGGCG CTGCGCACCT TGTCGGTGGC CTACCGCCCC
CTGGCCCCGG GCGAGGATCC GCAAGATGCC GAAGCACTGG AGAAAGAGCT GATCTTTGTC
GGCACGGTCG GGATTATTGA CCCGCCGCGT CCGGAAGCGG CCAAGGCAAT CGGCGAGGCG
CACCGGGCCG GCATCCGGGT GCTGATGATC ACCGGCGACC ATCCGCGCAC GGCCGCCCGC
ATCGCGGCCG ACCTGGGCAT CGTGGCGCCG GGCACACCGG CATTGACCGG CAGCGATCTG
GACGCCCTGG ACGATGCGGC CTTTGGCGCC GCCGTGCGCC AGCACGCGGT GTACGCGCGA
GTGGCACCCG CGCACAAGCT GCGCATCGTG GCCGCGCTGC AGGCCGACGG CAACATCGTG
GCCATGACCG GCGACGGCGT CAATGACGCA CCAGCGCTCA AGGCGGCCGA CATCGGCGTG
GCGATGGGCA TGACCGGCAC GCAGGTGACC AAGGAAGCGG CCAACATGAT CCTGGCCGAC
GACAACTTCG CCACCATCGT CGAGGCGGTG CGCGAGGGCC GCGGCATCTT CGGCAACATC
CGCAAGTTCC TGCGCTACTT GCTGTCCTCG AACATGGGCG AGGTGCTGAC CGTGTTCCTG
GGCGTGGTGG GCGCTGGCGT GATCGGCTTG AGCGGCCAGG GCGAAGGGCT GGTGCTGCCT
TTGCTGGCCA CCCAGATCCT GTGGATCAAC CTGATCACCG ATTCCGGCCC GGCCCTGGCC
CTGGGCATCG ACCCCGAAAC CGAGGACGTG ATGGCGCGGC CACCCCGCAA GTCCAGTGCG
CGTGCGATCG ATGCGCGCAT GTGGTGGGGC GTGGTCCAGA TTGGCCTGGT GATGGCGCTG
GCTACCTTGC TGACGATCGA CATGTACCTT GTCGGCGGGC TGATCGAAGG CTCGCAGAGC
CTGGCCAACG CCCGCACTGC GGGCTTCACG GTCTTGGTGT TCGCCCAGCT GTTCAACAGC
CTGAACGCCC GCTCGGAAAC CACCAGCGCA TTCCATCACC TGTTCGTCAA TCCCTGGCTG
TGGGGTGCGA TCGCCTTGTC GTTGATCCTG CAGGTGCTGG TCGTTCACGT CGGATGGTTG
AACGTGGCCT TTGGGACCGA GCCGCTGACG CTGGCGCAAT GGGCAGGCTG CCTTGCGATG
AGCAGCACCG TGTTGTGGTT TGGCGAGATG CGCAAATGGA TGCTCCGAGC CTGGTTTCGG
TAA
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| Protein sequence | MTSQQKAAPA MTEPAAPNDP SLQDAGDLAQ SLDTDLDKGL TAQEAARRLA HDGPNELRAA
PQVPAWRRLL GQFQDPLIYL LLAAIAVALV AWGIEGRVGW PVDASVIAAI VLLNGVLGYA
QEAKAENAVA ALARMTAVTS AVVRGGQTTQ IPSAQLVRGD LLVLAEGDAV GADARLVRAA
SLRVQEASLT GESEAVLKDA ATLAQPSALA DRLNMVFKGT AVAQGTALAV VTATGMATQM
GSIAQMLDST REEPTPLQKE VARIGRMLGI AVVIIAFVVM ATVLLAFEVR TSADLITVLL
LGVSLAVAAV PEGLPAILSV VLAMGVQRMA RRHAIVKQLS SVETLGSASV ICSDKTGTLT
RSEMTIERVM TASGSTHVTG VGYTPNGRVE HQGAELGAGA LHAEHIVVLS GGSLASNADL
RQLGDGTWEI QGDPTEAAFL VAERKLGVQA RRQQRFERVA ELPFTSERKM MSTIERDHEH
GDALMVITKG APDVLLARCT RVRVGLDVLP FDDALRARAL GDVDRLSGEA LRTLSVAYRP
LAPGEDPQDA EALEKELIFV GTVGIIDPPR PEAAKAIGEA HRAGIRVLMI TGDHPRTAAR
IAADLGIVAP GTPALTGSDL DALDDAAFGA AVRQHAVYAR VAPAHKLRIV AALQADGNIV
AMTGDGVNDA PALKAADIGV AMGMTGTQVT KEAANMILAD DNFATIVEAV REGRGIFGNI
RKFLRYLLSS NMGEVLTVFL GVVGAGVIGL SGQGEGLVLP LLATQILWIN LITDSGPALA
LGIDPETEDV MARPPRKSSA RAIDARMWWG VVQIGLVMAL ATLLTIDMYL VGGLIEGSQS
LANARTAGFT VLVFAQLFNS LNARSETTSA FHHLFVNPWL WGAIALSLIL QVLVVHVGWL
NVAFGTEPLT LAQWAGCLAM SSTVLWFGEM RKWMLRAWFR
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