Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4468 |
Symbol | |
ID | 4685632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | - |
Start bp | 28632 |
End bp | 29723 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639826321 |
Product | parB-like partition proteins |
Protein accession | YP_973486 |
Protein GI | 121583045 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.99602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 7.6726e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGATTG ACGACACTTC CCCCTTTTTG CCCTTTGCTG AACGCGCGCC GAAGCCCGTG GTCACGCTCA AAGCCCGCGC CCGGTTTTCT GAGGGCACGC TCGCCAGCCT GCGCGCTGTC AGCGCCCAGC CAGGCGAGGC GCTGCGCCTG CCCCTGGCCG ACATCGACGA AGACCCGCAC CAGCCGCGCA CCGTCTTTGA CACGGCCGAG CTGCAAAGCA TGGCCGACAG CATCCGAGCC CATGGCGTGG TCCAGCCCAT CGTCGTGCGC CCGCCCGTCA AGGGTCGCTA TCTGCTGGCC TTTGGCGCGC GCCGCCTGCG CGCATCCCGG CTCGCCGAAG TGCCCGACAT TCCCGCAGTG ATCCGCCCGG CCGGCCCAGG CGACTTTGCC GAGCAGCTCG TCGAAAACCA GCAGCGCGCC GACCTGTCCA ACTCTGACCT GGCCGCGGCC ATCGCGCGGC TGGTGGCCGA AGGCGCCAGC ACCAAGGACA TTGCCGCGCT GTGCGCGCTC AAGGACTACC AGGTCGCTGC CTTTCGGCAG GCGGGCAACT TCCCGCCCGA GCTTGCGTCT CGCCTGGACA CATCCGACAT GCGCGCGCTT TACGACCTGT ACCGCCAGTG GGGCAAGACC CCAAGCGAGG TCGTGGCCGC CTTGCCGGAG GACGGCGTGT TCATCAGCGT GACCGAGGCC AGGCGCATCA TCGGCGCGAT CACCGGCAAG CCGACCGGCT CCATCGTGCT CGAGCGCGCC CGGGCGGAGG CTTTTCAGGA GCGCGGCCAG CCGCTGCCGG GCGGTGACCC CGAAACAGCG CCCCCGATGC GCGAGCCTTC CCCGGAAAAA CCGATCCATC CTATCGAGGA GCCGCCGGCG TCGAGGGACT TGCCGGTGCA GGCCAGGTCT AAAGCCGCCC CGGGTACTGT CCAGGCGCCC GGGACCGGCG CGCCCGTATT CTTTGTCGCT GCGGACGACG GGCGCACCGG CCGGCTGGTG GTGGACCGGC GGGCCAACAG GGCAGGGTGG GCCCTGGTGG CCTACGCCAA CGGCTTGGAA GAAGTGGACG CGGCGCGGCT GCGGATTGTT CGCATCGAGT GA
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Protein sequence | MMIDDTSPFL PFAERAPKPV VTLKARARFS EGTLASLRAV SAQPGEALRL PLADIDEDPH QPRTVFDTAE LQSMADSIRA HGVVQPIVVR PPVKGRYLLA FGARRLRASR LAEVPDIPAV IRPAGPGDFA EQLVENQQRA DLSNSDLAAA IARLVAEGAS TKDIAALCAL KDYQVAAFRQ AGNFPPELAS RLDTSDMRAL YDLYRQWGKT PSEVVAALPE DGVFISVTEA RRIIGAITGK PTGSIVLERA RAEAFQERGQ PLPGGDPETA PPMREPSPEK PIHPIEEPPA SRDLPVQARS KAAPGTVQAP GTGAPVFFVA ADDGRTGRLV VDRRANRAGW ALVAYANGLE EVDAARLRIV RIE
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