| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4464 |
|---|
| Symbol | |
|---|
| ID | 4685626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008758 |
|---|
| Strand | + |
|---|
| Start bp | 25439 |
|---|
| End bp | 25990 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639826317 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973482 |
|---|
| Protein GI | 121583041 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00000000000102719 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CGCTGCGCAA AATGCGCGCC GCGCTGTACG AGTATCTTGA CAACGGAGTG
GGACCGACCC CGAGCACGCG TACACTTTTC GCCAATCACC CTGCTGAATC CGATGAGCTG
TTGAAAATGC TTTTTGCGGA GTACGACGCA GGAGACAAGA CCGACCTGGA AATTGAAGCG
CTGCTTCGCA TACGGCTGGT CACGTGTCTT GTACACACGG AAAAGAGCAG AAAGGCGCGT
GCTAGGCAGC ACGCGCTCGA CGTGGCTTAC GCTTTTCCGC CCATTTGCAA AGATGCTACT
TTTATGGCTT TGCGCTTTGT CTCGCACCAT GCCGAGGATC CGGCGCAGTG CGAAAACCTG
GTGCGGGATT ATCCCGCAGC AGCTGCGGAA TTGCTGGCCA CGCTGCTGGT GAGTAAAACG
CACGAGCGCT TTTACGCGCG CACCAAGGGC GAATCCGCGC ATTTGCAGGC GGAAATCGAC
ACGCTGCGCG CCATGATCGC ACGCACAGCA GCCCGCAGGA TCATGGACGA AATGGGAGGT
GGCGCGTGCT GA
|
|---|
| Protein sequence | MSAALRKMRA ALYEYLDNGV GPTPSTRTLF ANHPAESDEL LKMLFAEYDA GDKTDLEIEA
LLRIRLVTCL VHTEKSRKAR ARQHALDVAY AFPPICKDAT FMALRFVSHH AEDPAQCENL
VRDYPAAAAE LLATLLVSKT HERFYARTKG ESAHLQAEID TLRAMIARTA ARRIMDEMGG
GAC
|
|---|
| |