Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4463 |
Symbol | |
ID | 4685625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | + |
Start bp | 24543 |
End bp | 25442 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639826316 |
Product | hypothetical protein |
Protein accession | YP_973481 |
Protein GI | 121583040 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000000037222 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGCAA ATATAAAACT AATTGGCAGT CAATCCAAAC CCCCCTTAAA ACCAGAGGGC GTTTTTCCTT CCAGCCCTCA GCGCAAACGT CAGCTTTCCA AAGACCTGCG GGATATTTTG ACTTGTCTTG TATTGTCGGA TGGCCCCATC GAGGAGGTCG GCGCAATTTG CGAAAAAAAT CCACAAACCG CACAATGGCT CATTCGAAAA ATTCAAGATG TGGATGATCT GCGTGTGCGA GACGGAAAAG CGTCAGGCCG TTTCGGCGTT TATGCAGATG TAGCGCGTCA AGCCCTCGCA AGGGTTGGCG CCATGGCCAT CCTGGACAAA ATCATGGAGG AAAAATTGGC CGAAGATCTG ATCGCAAGAA TGCGTGCAAT GCTAGAAGAA CACGCGCGCG TGCCCTTCGG CCTGCCAGAC TGCGCCGCTT TTTTTGCAGA ACATCCAGCA GAATCTGATG AAATTCTGAG CCGATTGTTC GCCGAGTATG ACGCTGGCGC AGGTGACGCT GTGGCACCGG ACATTCGCGC GCTTATAAAG CTGCAGCACG TCGCGCGAAA GTATGTGTCT CGTCAGCGCT CCGCAGCGCT GACGCGTTTG GGCGTGCTGC GCACAGCGTA CGAATATCCG CCAACCCCAC TACGCGCGAT GTACCTGGCA CTTCGCGGCG TAACGCACGC GGGCGACGAG CATGAATTTT GCGAAGCGCT TGTGCGTGAC CACCCCAGCG TTGCTCGTGC ACTGATGGCG CAGCTGGTGA TTGAGCAGCG CCACGAGCAT TTTTACGAAA TGCGCCCCGG CGCCTGGCAC GACACTGCGG CGGAAATCGA CACATTGCGA AGCATGATCG CCCGCACCAC GGCCCGAAAG ATCCTGGACG ATATGGACGG TGCACAATGA
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Protein sequence | MKANIKLIGS QSKPPLKPEG VFPSSPQRKR QLSKDLRDIL TCLVLSDGPI EEVGAICEKN PQTAQWLIRK IQDVDDLRVR DGKASGRFGV YADVARQALA RVGAMAILDK IMEEKLAEDL IARMRAMLEE HARVPFGLPD CAAFFAEHPA ESDEILSRLF AEYDAGAGDA VAPDIRALIK LQHVARKYVS RQRSAALTRL GVLRTAYEYP PTPLRAMYLA LRGVTHAGDE HEFCEALVRD HPSVARALMA QLVIEQRHEH FYEMRPGAWH DTAAEIDTLR SMIARTTARK ILDDMDGAQ
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