Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4456 |
Symbol | |
ID | 4685633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | - |
Start bp | 16794 |
End bp | 17612 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639826309 |
Product | hypothetical protein |
Protein accession | YP_973474 |
Protein GI | 121583033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.169598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.000128626 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGAAA TTTCACCTGG GCGACGTGTT TCACCAATCG CGGACCTTGA TCGGGAGCAG ATCAAAGAGT TGTGCGAACT TCACCCCTTA GAAATGGGGC AGTTGTGCGC AAAGGTCGGG CTGAACAAAT CGGTGCTGAG CAATTTCCTG GCGGGTCGCC GGCCGTTCCC CCAAAAATTC GCACCGACTT TCCTGCGGCA AATTGGGCTG AACGTCAAAG GTGAAATTGA TCCACGCCAT TGTTTCTATT TGACAGTTGG GCCGGGTCTT GAAGACCTAG CGGCCAAGTG GATCAAGCGT CTGTTTCCGC TCGGAGGAAC GATGTGCATC GTGTACAAAA ACATGCGATC GGACGATCCA GAGGAGGGCG AATACCGGGT GGAAGCCGGG GTGGCGCTGA CAGGAGGTGA GCTCGTTGCC GTGGTTCGGG ATGACGTGAA CTTCGGGGAT TTTGCGTGGA TTCCGGGTGT TTGGGAGACC GGTAATTCCA TCAATGCAGA CGACCTGCTC GACGTGACGC GCTTGCCCGC GAAAAAAGAC GTCCTGGCCG CGATGGCCAG TGTTCCGACA TACGACAATA TGATTTGGGG CGAAGTCCAG CGCGTTGCTG AGGCTGCGGG CCTCACGGGC GATGAGGTGC TTCGGATTGT GGAGGATGCG ATCCGTGGAT TTTCTGAGTC GCCACAGCGG CGCGATGCAT TCGATGTCGA AGGGCGCAAG GCCGAAGCAA CTCGAATCGC TGCAATCCAC TCCTTGCCTG AAAACTCAGC TTTCAGGCGA AGTTCTGGAA GTCTTGTCGC CGACAAGCCC AACAGCTAA
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Protein sequence | MNEISPGRRV SPIADLDREQ IKELCELHPL EMGQLCAKVG LNKSVLSNFL AGRRPFPQKF APTFLRQIGL NVKGEIDPRH CFYLTVGPGL EDLAAKWIKR LFPLGGTMCI VYKNMRSDDP EEGEYRVEAG VALTGGELVA VVRDDVNFGD FAWIPGVWET GNSINADDLL DVTRLPAKKD VLAAMASVPT YDNMIWGEVQ RVAEAAGLTG DEVLRIVEDA IRGFSESPQR RDAFDVEGRK AEATRIAAIH SLPENSAFRR SSGSLVADKP NS
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