Gene Pnap_4456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4456 
Symbol 
ID4685633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp16794 
End bp17612 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content56% 
IMG OID639826309 
Producthypothetical protein 
Protein accessionYP_973474 
Protein GI121583033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.169598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000128626 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGAAA TTTCACCTGG GCGACGTGTT TCACCAATCG CGGACCTTGA TCGGGAGCAG 
ATCAAAGAGT TGTGCGAACT TCACCCCTTA GAAATGGGGC AGTTGTGCGC AAAGGTCGGG
CTGAACAAAT CGGTGCTGAG CAATTTCCTG GCGGGTCGCC GGCCGTTCCC CCAAAAATTC
GCACCGACTT TCCTGCGGCA AATTGGGCTG AACGTCAAAG GTGAAATTGA TCCACGCCAT
TGTTTCTATT TGACAGTTGG GCCGGGTCTT GAAGACCTAG CGGCCAAGTG GATCAAGCGT
CTGTTTCCGC TCGGAGGAAC GATGTGCATC GTGTACAAAA ACATGCGATC GGACGATCCA
GAGGAGGGCG AATACCGGGT GGAAGCCGGG GTGGCGCTGA CAGGAGGTGA GCTCGTTGCC
GTGGTTCGGG ATGACGTGAA CTTCGGGGAT TTTGCGTGGA TTCCGGGTGT TTGGGAGACC
GGTAATTCCA TCAATGCAGA CGACCTGCTC GACGTGACGC GCTTGCCCGC GAAAAAAGAC
GTCCTGGCCG CGATGGCCAG TGTTCCGACA TACGACAATA TGATTTGGGG CGAAGTCCAG
CGCGTTGCTG AGGCTGCGGG CCTCACGGGC GATGAGGTGC TTCGGATTGT GGAGGATGCG
ATCCGTGGAT TTTCTGAGTC GCCACAGCGG CGCGATGCAT TCGATGTCGA AGGGCGCAAG
GCCGAAGCAA CTCGAATCGC TGCAATCCAC TCCTTGCCTG AAAACTCAGC TTTCAGGCGA
AGTTCTGGAA GTCTTGTCGC CGACAAGCCC AACAGCTAA
 
Protein sequence
MNEISPGRRV SPIADLDREQ IKELCELHPL EMGQLCAKVG LNKSVLSNFL AGRRPFPQKF 
APTFLRQIGL NVKGEIDPRH CFYLTVGPGL EDLAAKWIKR LFPLGGTMCI VYKNMRSDDP
EEGEYRVEAG VALTGGELVA VVRDDVNFGD FAWIPGVWET GNSINADDLL DVTRLPAKKD
VLAAMASVPT YDNMIWGEVQ RVAEAAGLTG DEVLRIVEDA IRGFSESPQR RDAFDVEGRK
AEATRIAAIH SLPENSAFRR SSGSLVADKP NS