Gene Pnap_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4447 
Symbol 
ID4685640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp8927 
End bp9319 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content63% 
IMG OID639826301 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_973466 
Protein GI121583025 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.151096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0837239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TGCACACCAT GGCGAGCCAG ACTCGCATCA CCCAGGTCCC CAAGCGCCGG 
TTCTACAGCC CTGAGCTCAA GCGGCAGGTG GTCCAAACCT GCGCGCAGCC TGGCGCGTCC
ATTGCTGCCG TAGCGCTGCA ACACGGCATC AATGCCAACA TCGTGCACCG CTGGATACGT
GAGCATCGCC AGGAAATGCT GGTCGTTCAG CCACAGGCGT TTGTGCCGGT CACTTTGAGC
ACGGAGCCCG AACCCGTTGC CACCCAACCT GTGGCGGTGG TCAGGCCAGA GATCCGCATG
GAATTGCGGC GCGGCGCCTC CTCGGTGACG GTGATGTGGC CGAGCGAGCT GGCAAGCGAT
TGCGGCGCCT GGCTGCGCGA GTGGTTGAGA TGA
 
Protein sequence
MNIMHTMASQ TRITQVPKRR FYSPELKRQV VQTCAQPGAS IAAVALQHGI NANIVHRWIR 
EHRQEMLVVQ PQAFVPVTLS TEPEPVATQP VAVVRPEIRM ELRRGASSVT VMWPSELASD
CGAWLREWLR