Gene Pnap_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4399 
Symbol 
ID4685475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp317593 
End bp318579 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content61% 
IMG OID639826254 
Producthypothetical protein 
Protein accessionYP_973419 
Protein GI121582977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.196757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACACA TCAGCGATCT ATTCCCGGCA GACCCGCAAA CGGCTGCCAA TGGCCAGGCC 
CAGGGCAGCC TCGGCGCCAG AAGCGTTCGG GAGATCAAAC CGCTGAGCCC GAAAAGCGCG
GAATTCTTAA GGCAAAAAAC CCAGGCCGCG CTGCAAACAC TTGGCCAGCC CGAGCCGCCA
GCCGCGCCCG CCAACCCCGT GCAACCCGTG CTGCAGCTCG CGTTCAGCAA GTGGGACGAA
GACAGGCGCG GGGTGCCCAA CCCCTTGATT CGGGGCGGTC TTTTCAGCAC CCGAACCTCC
AAGGCGCGGC TGTCGTTCAA GTCCGCAAAA ATCGCATCGC TGTCGAATGC GGACATCCTG
TACACGGGCG AGGAGTTGCG CCAGGATGAC CTTTCCGTCT GGCTGGCCAT CGTTCATCTG
GGCCGCAACC GCGTGCTTGG CGAGCCGATC TATTTCACGG CCTATGCCAT CATCAAGGAC
ATGAACTGGC GCATGCATTC GGACAGCTAC GCGAGGCTGC GCAACTCGAT CGACCGGCTC
AAGGTCACCA GCATCAAAAT CACGCTGAGG AACGAGCGGT CGGGCTACGC GGGCTCGTTG
ATCCGGGACT TCCTTTTCGA TGGCCTCGAC GAAGCGGGCA AAAGCAGCTT TGTCGTGCGT
CTTGAGCCCC CCATTGCCAG CTTGTTCCTG CACGAGAACA CCACGCTCGT CGAGTGGGCG
CAACGCCGGC AGATCGGCAG CAAGGCGGCC TTGACGCTGT GGCTGCACAT GTTTTATTCG
AGCCACCGCG AGCCCATCCC CTACTCCGTC TCCAAACTGC GCGAGCAGTG CCTGTCGGAG
GAAAAAGACC TCAGCAACTT TCGCGCGCGC CTGCGCAAGT CACTCGAAAC ACTGATTTCG
GTGGGGCTGC TGGTTTCATA TGCCATATTG GACGACATGG TTCATGTCAA GCGAGCCGTG
CTCAACAGGC GGCTGCAGTT GGCCTGA
 
Protein sequence
MQHISDLFPA DPQTAANGQA QGSLGARSVR EIKPLSPKSA EFLRQKTQAA LQTLGQPEPP 
AAPANPVQPV LQLAFSKWDE DRRGVPNPLI RGGLFSTRTS KARLSFKSAK IASLSNADIL
YTGEELRQDD LSVWLAIVHL GRNRVLGEPI YFTAYAIIKD MNWRMHSDSY ARLRNSIDRL
KVTSIKITLR NERSGYAGSL IRDFLFDGLD EAGKSSFVVR LEPPIASLFL HENTTLVEWA
QRRQIGSKAA LTLWLHMFYS SHREPIPYSV SKLREQCLSE EKDLSNFRAR LRKSLETLIS
VGLLVSYAIL DDMVHVKRAV LNRRLQLA