Gene Pnap_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4397 
Symbol 
ID4685479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp315594 
End bp316325 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content58% 
IMG OID639826252 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_973417 
Protein GI121582975 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.403377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC AGACCCTTAC CCAATTACGC AGCCTGCGCC TGGATGGCAT GGTGCGCGCC 
ATTGAAGAGC AAGCCACCAG CATCGCGGTC AGCGCCCTGG GTTTTGATGA AAGATTCTCC
CTGCTGGTGC AGCGCGAGGT GGCATGGCGC GATGAGCGCC GGGTCGAGCG TCTGCTTAAA
GCCGCCAAAC TCAAAGTGAG CTCAGCCTGT GTCGAAGATA TCAATTGGCG CGCCAGTCGC
GCACTTGATC GCGCCCTGGT GACTGCCTTG GCCGGGGGTG ATTGGCTTCG CAATGCGCAG
AATCTGCTGA TCACCGGTGC CACCGGTTGT GGCAAGACCT GGCTGGCGTG TGCCTTGGCG
CATCAAGCCG CTCGCTTAGG CTTCTCGGTG CTGTACGTGC GCGCCGGGCG GCTCTTTGAT
GAACTGCATG TCGCCCATGG TGATGGCAGC CTTAATCGGC GAATGAGTCA ACTGGCCAAG
CTTGATTTAC TGGTGATTGA TGACTTTGCC ATTTCTCCAA TGGGCGCGCC CGAGAGAAAC
GATTTGCTGG AGGTGCTCGA TGATCGGGTG GGCACGCGCT CGACGTTGAT CACCAGTCAA
TTGCCGGTAA AAGCCTGGCA TACCTATCTG GACGATCCAA CGCTGGCCGA TGCCATTCTC
GATCGTGTCG TGCACAGCAG CCACCGGATT GATCTCAAGG GCGCCACGCT GCGAGATCCG
AATACAAATT GA
 
Protein sequence
MNEQTLTQLR SLRLDGMVRA IEEQATSIAV SALGFDERFS LLVQREVAWR DERRVERLLK 
AAKLKVSSAC VEDINWRASR ALDRALVTAL AGGDWLRNAQ NLLITGATGC GKTWLACALA
HQAARLGFSV LYVRAGRLFD ELHVAHGDGS LNRRMSQLAK LDLLVIDDFA ISPMGAPERN
DLLEVLDDRV GTRSTLITSQ LPVKAWHTYL DDPTLADAIL DRVVHSSHRI DLKGATLRDP
NTN