| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4396 |
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| Symbol | |
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| ID | 4685418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 314014 |
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| End bp | 315552 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639826251 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_973416 |
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| Protein GI | 121582974 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.624598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.336917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCA ACAGAATCAC CATGCGCCAA ATCCGAGAAT CCCTGCGCCT GCACCTGCAG
GCCAACCTGA GCTACAACGA GGTAGGCCGT AACCTCAAGA TATCCAAAAG CGTAGTCGGC
AAATACATGT CACTGGCGCG TGTGGCCGGT GTTGACTGGT CCGTTGCACA AACCTTGAGC
GACCAAGAGC TGGAGGCCAA GCTGTACAAG GCAGCGTTAC CGCGCAACAG CAAACAAGCA
CTGCCTGACT TTGCCCAGAT ACACACTGAG CTCAAACGCG CCGGTGTCAC CCTGCAACTG
CTGTGGGAGG AATACGCCAA GGGCAACGAC CTGGCCTTCA AGTACACCAG CTTTTGCGTC
AAATACCGGG AGTGGGCCAT GGGGCTGAAG CGCTCCATGC GCCAGACCCA TATTGCCGGT
GAGAAACTCT TTGTTGACTA CGCCGGTCAA ACCGTCCCGC TGATTGATGC CGGCACCGGC
GAAATCACCA AGGCACAGAT ATTTGTGGCC ACCCTTGGCG CCTCCAACTA CACCTTCGCC
TGTGCCACGG CGCGCCAGAC CACAGCCGAC TGGATTGGCG CCCAGGTGCT GGCATTGGAG
TATTTCGGTG GTGTGCCACG CCTGATCGTG CCAGACCAAA CCCGCTCCCT GATCAAAAAC
CCGTGCAGCT ACGACCCGCA GAACAACCGT CTGTATGAAG AATTCGCCGC CCACTACGGT
TGTGCCCTGC TGGCAGCAAG GCCGGCTCAC CCCAGAGACA AGCCCAAAGT CGAGAACGCC
GTCCTGGTCG TTGAACGCTG GATACTGGCA CGCCTGCGTA ATCGCAAGTT CTTCAGTCTC
ATGGAGCTCA ACCACGCCAT TGCGCTGCTC CTGAACGATT TGAACCAGCG CGCCTTCAAA
AAGCTGCCCG GCAACAGGCG CAGTGCCTTT GAGCAGCTTG ATGCTCCAGC CCTGCGTCCA
CTGCCGGCCA AACGCTTTGA GTTATTCCGC TGGAAATCGG CCAAGGTCAA TGTCGACTAC
CACGTGGAAT TTGACGGCCA TTACTACAGC GTGCCCCACA CCCTGGTGCG CACCACCGTG
GAACTGCGCG CCAGTGACAC CTTGCTGGAA TGTTATTCCT CCAACCAGCG CGTGGCTTGC
CACGCTGTCA GCCCCAAGCG CGGTGCCCAC ACCACCACGC CTGAGCATAT GCCTGCGTCG
CACCGGGCGC ATCTGGAGTG GACCCCGCAA AAGCTCATCG ACTGGGGCCT GCGCATTGGC
GTGAGCACCG CAGCGGTGGT GACCTGGCAG CTTGAACACC GCGCCCATCC TGAACAGGGC
TACCGGGCTT GTTTGGGCTT GCAGCGCTTG GCACGCGAAT TCACGCCGGC CAGGCTGGAG
GCGGCCTGCA CCCGAGCACT GGCCATTCGC TCCCTTACCT ACCGCAGCGT GGCCTCCATT
CTCAAAACAG GCTTGGATCG TCAGCAAAAC CTGCCCACCA TGACACCGGG CGCGCTCCCG
GCGCACGACA ACATCCGTGG CGCAGATTAT TTCCACTGA
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| Protein sequence | MPTNRITMRQ IRESLRLHLQ ANLSYNEVGR NLKISKSVVG KYMSLARVAG VDWSVAQTLS
DQELEAKLYK AALPRNSKQA LPDFAQIHTE LKRAGVTLQL LWEEYAKGND LAFKYTSFCV
KYREWAMGLK RSMRQTHIAG EKLFVDYAGQ TVPLIDAGTG EITKAQIFVA TLGASNYTFA
CATARQTTAD WIGAQVLALE YFGGVPRLIV PDQTRSLIKN PCSYDPQNNR LYEEFAAHYG
CALLAARPAH PRDKPKVENA VLVVERWILA RLRNRKFFSL MELNHAIALL LNDLNQRAFK
KLPGNRRSAF EQLDAPALRP LPAKRFELFR WKSAKVNVDY HVEFDGHYYS VPHTLVRTTV
ELRASDTLLE CYSSNQRVAC HAVSPKRGAH TTTPEHMPAS HRAHLEWTPQ KLIDWGLRIG
VSTAAVVTWQ LEHRAHPEQG YRACLGLQRL AREFTPARLE AACTRALAIR SLTYRSVASI
LKTGLDRQQN LPTMTPGALP AHDNIRGADY FH
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